Streptomyces leeuwenhoekii: sle_52470
Help
Entry
sle_52470 CDS
T04414
Symbol
sle_52470
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sle
Streptomyces leeuwenhoekii
Pathway
sle00040
Pentose and glucuronate interconversions
sle01100
Metabolic pathways
sle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
sle_52470 (sle_52470)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
sle_52470 (sle_52470)
Enzymes [BR:
sle01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
sle_52470 (sle_52470)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
CQR64705
UniProt:
A0A0F7VY35
LinkDB
All DBs
Position
chromosome:6158072..6159379
Genome browser
AA seq
435 aa
AA seq
DB search
MRLRHCAAALGLLGLLCVPAHAEDARGTGRDLGRETLARHDGWAAAEGGTTGGAAADEAH
VFTVTDRAGLVRALDGGSDTPKIIKIAGTIDANTDDSGRRLDCADYATGGYSLKKYLAAY
DPRTWGAAKPAGPQEEARRASAARQAERVVLPVGSHTTIVGLGDDAVLKGASLQIKNADN
VIVRNLELRDAYDCFPVWQPNTGGLGDWKAAYDTLWLNNAGHVWIDHVTASDKGRPDEKE
PTYYARNYLRHDGLLDITNGSDLVTVSWSRFADHDKAMLIGNSDSAAGDRGRLRVTLHHN
EFTSVVQRAPRVRFGQVHLYNNRYVVPEDAHDYRYSIGVSTESRIHAENNAFTTPAHVEA
ADLVKSWNGTALHASGTLFNGYPVDLTAIYNAYNSGSERDLGTDVGWSPALHGRIDSAAA
ADRAVARGAGAGRIR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcaggcactgcgccgcggccctcggcctgctgggcctgctgtgcgtccccgcc
cacgccgaggacgcccgcggcaccggccgcgacctcggccgcgagaccctggcccggcac
gacggctgggcggcggccgagggcggcaccaccggcggcgccgcggccgacgaggcccat
gtcttcacggtgaccgaccgggcggggctggtgcgcgccctggacggcggcagcgacacc
ccgaagatcatcaagatcgccgggacgatcgacgccaacaccgacgactccggacgccgc
ctggactgcgccgactacgccaccggcggctacagcctgaagaagtacctggccgcctac
gacccccgcacctggggcgccgccaagcccgccggcccccaggaggaggcccgccgggcg
tccgccgcccgccaggccgaacgcgtggtgctgccggtcggctcccacaccaccatcgtg
ggcctgggcgacgacgccgtcctcaagggcgccagcctccagatcaagaacgcggacaac
gtcatcgtccgcaacctcgaactgcgcgacgcctacgactgcttccccgtctggcagccc
aacaccggcggactcggcgactggaaggccgcctacgacaccctctggctcaacaacgcc
ggccacgtctggatcgaccacgtcaccgcctccgacaagggccgcccggacgagaaggaa
cccacctactacgcccgcaactacctgcgccacgacggcctgctcgacatcaccaacggc
tccgacctcgtcaccgtctcctggagccggttcgccgaccacgacaaggccatgctcatc
ggcaacagcgacagcgccgccggcgaccggggccggctgcgcgtcaccctgcaccacaac
gagttcacctccgtcgtccagcgcgccccgcgcgtccgcttcggccaggtgcacctctac
aacaaccggtacgtcgtccccgaggacgcccacgactaccgctactccatcggcgtctcc
accgagtcgcgcatccacgcggagaacaacgccttcaccacccccgcccacgtcgaggcc
gccgacctggtcaagagctggaacggcaccgccctgcacgcgtcgggcaccctcttcaac
ggctacccggtggacctgacggcgatctacaacgcctacaactcgggcagcgaacgcgac
ctgggcaccgacgtcggctggagccccgccctgcacggacggatcgacagcgcggcggcg
gccgaccgggcggtggcgcgcggcgcgggcgcggggaggatccgatga
DBGET
integrated database retrieval system