Streptomyces leeuwenhoekii: sle_55420
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Entry
sle_55420 CDS
T04414
Symbol
sle_55420
Name
(GenBank) HTH-type transcriptional regulator nfxB
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
sle
Streptomyces leeuwenhoekii
Brite
KEGG Orthology (KO) [BR:
sle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sle03000
]
sle_55420 (sle_55420)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sle01504
]
sle_55420 (sle_55420)
Transcription factors [BR:
sle03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
sle_55420 (sle_55420)
Antimicrobial resistance genes [BR:
sle01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
sle_55420 (sle_55420)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_24
Xre-like-HTH
TetR_C_11
PilB3_C
HTH_31
HTH_24
HTH_IclR
LacI
HTH_20
HTH_26
DUF6471
TetR_C_29
AbiEi_4
TrmB
COR-A
Motif
Other DBs
NCBI-ProteinID:
CQR64999
UniProt:
A0A0F7VWR1
LinkDB
All DBs
Position
chromosome:6488797..6489375
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AA seq
192 aa
AA seq
DB search
MSHMRYSCLMAVDRDHVLRSAAALLTRRSTATMDEVARAAGISRATLHRHFAGRDALVRA
LEDLGIAECEAALEAARPDEGPAADAVRRLVRAFEPSAGLLAFLYSENQLFEGEQQNQGW
ARIDARLAALFRRGQENGEFRIDLSPVWLTEALYGLLASGAWAVSEGRVARNDFTHMIVE
LLLGGATRREGS
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacatgcgctacagttgtctcatggctgtcgaccgtgaccatgtgctgcgcagt
gccgccgccctgctgacccgcagatccaccgcgaccatggacgaggtcgcccgggccgcc
gggatcagccgcgccacgctgcaccgccacttcgccggacgcgacgccctggtacgggcc
ctcgaggacctcggcatcgccgagtgcgaggccgccctggaggcggcgcgccccgacgag
gggccggccgccgacgcggtgcgccggctggtccgggccttcgagccctccgccggactg
ctcgccttcctctactccgagaaccagctgttcgagggcgagcagcagaaccagggctgg
gcccgcatcgacgcccggctcgccgcgctgttccggcggggccaggagaacggcgagttc
cgcatcgacctcagccccgtctggctcaccgaggcgctgtacggcctgctggcctccggc
gcctgggcggtgagcgagggccgcgtggcccgcaacgacttcacccacatgatcgtcgag
ctgctgctcggcggcgctacccgtagagagggatcatga
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