KEGG   Streptomyces liliifuscus: JEQ17_07445
Entry
JEQ17_07445       CDS       T08169                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
slf  Streptomyces liliifuscus
Pathway
slf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:slf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    JEQ17_07445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slf03400]
    JEQ17_07445
DNA repair and recombination proteins [BR:slf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     JEQ17_07445
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      JEQ17_07445
SSDB
Motif
Pfam: UvrA_DNA-bind ABC_tran AAA_21 AAA_29 DnaJ_CXXCXGXG AAA_16 nSTAND1 AAA_33 HUTI_composite_bact AAA_22 AAA_18 Viral_helicase1 MeaB
Other DBs
NCBI-ProteinID: QQM39317
UniProt: A0A7T7KUK9
LinkDB
Position
1710790..1713147
AA seq 785 aa
MHSPHDPYVRVRGAREHNLQGVDVDIPRDVLAVFTGVSGSGKSSLAFGTIYAEAQRRYFE
SVAPYARRLIHQVGAPKVGDISGLPPAVSLQQRRSTPTSRSSVGTVTNLSNSLRMLFSRA
GDYPPGAERLDSDAFSSNTAVGACPECHGLGRVHRTTEESLVPDPTLSIREGAIAAWPGA
WQGKNLRDVLDALGYDVDRPWRELPAEQREWILFTDEQPVVTVHPVRDAQRIQRPYQGTY
MSARRYVMKTFSDSKSQTLRAKAERFLEAAPCPVCGGSRLRAEALAVTFADRTIAELAAL
PLVELADSLTGHGDSETARVLTEDLLARISPVTELGLGYLSLDRATPTLSAGELQRLRLA
TQLRSGLFGVVYVLDEPSAGLHPADTEALLTVLDRLKASGNSVFVVEHHLDVMRGADWLV
DVGPKAGEHGGQVLHSGPVAELEHVRESATARFLFDRSPVPVREVRAPRGQLKVGPVTRH
NLRGVTAEFPLGVLTAVTGVSGSGKSTLIGEITEDLPGVGRLVGVDQKPIGRTPRSNLAT
YTGLFDVVRKVFAATREAHRRGYGVGRFSFNVAGGRCETCQGEGFVSVELLFLPSTYAPC
PDCGGARYNPETLEVTYRERNIAQVLDLTVEAAADFFADTPAVARSLATLLDVGLGYLRL
GQPATELSGGEAQRIKLASELQRVRRGHTLYLLDEPTTGLHPADVEVLMRQLHGLVDGGH
SVVVVEHDMAVVAGADWVVDLGPGGGDAGGRIVATGPPAEVARAAASATAPYLARALGTG
GSQSQ
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgcacagcccccacgacccctacgtccgtgtgcgtggtgcgcgtgagcacaatcttcag
ggggtcgatgtcgatattccgcgggatgtgctggcggtcttcacgggggtgtccgggtcc
gggaagtcgtcgctcgccttcgggacgatctacgcggaggcgcagcggcggtacttcgag
tcggtggccccgtacgcgcgtcggctgatccatcaggtgggggcgccgaaggtcggggac
atcagcgggctgccgcccgcggtgtcgttgcagcagcggcggtcgacgccgacctcacgc
tcgtcggtcggtacggtcaccaacctctccaattcgcttcggatgctgttctcgcgtgcg
ggcgactatccgccgggggccgagcgtctcgactcggacgccttctcgtcgaacacggcc
gtcggggcctgtcccgagtgtcatgggctcggtcgggtgcaccgtacgaccgaggagtcg
ctggtccccgacccgacgctgtcgatccgcgagggcgcgatcgccgcgtggccgggcgcc
tggcaggggaagaacctgcgcgatgtcctcgacgcgctggggtacgacgtggaccggccg
tggcgcgaactgcccgccgagcagcgtgagtggatcctgttcacggacgagcagccggtc
gtgaccgtgcatccggtccgggacgcccagcggatccaacgcccgtaccagggcacgtac
atgagcgcgcggcgctatgtcatgaagaccttctcggactcgaagagtcagacgttgcgg
gccaaagccgagcggtttctggaggccgcgccctgtcccgtgtgcggcggcagtcggctg
cgggccgaggcgctcgcggtgacgttcgcagaccggaccatcgcggagctggccgcgctg
ccgctcgtcgaactggccgactccctcaccggtcatggtgattcggagaccgcccgcgtc
ctcaccgaggatctgctcgcgcgtatctcgccggtcaccgagctgggcctcggctatctc
agcctggaccgcgccacacccaccctttcggccggtgagctccaacggctgcggctggcc
acgcagttgcgctcggggctcttcggggtcgtgtacgtcctcgacgagccgtcggccgga
ctgcacccggcggacacggaggcgctgctgacggtcctcgaccggttgaaggcgtccggc
aactcggtgttcgtcgtggagcaccacctcgatgtcatgcgcggcgcagactggctcgtc
gacgtggggccgaaggcgggcgagcacggcggacaggtgctgcacagcggcccggtggcg
gagctggagcatgtcagggagtcggcgacggcccggttcctcttcgaccgctcccccgtc
ccggtacgtgaagtccgggcgccgcgcggccagttgaaggtcggcccggtgacacggcac
aacctgcgtggcgtgaccgccgagtttccgctcggcgtgctcaccgcggtcaccggcgtc
tccggctcgggcaagtccacgctcatcggcgagatcacggaggaccttccgggtgtgggg
cggctggtcggcgtcgaccagaagccgatcggccgtacgccccgctcgaatctggcgacg
tacacgggcctcttcgacgtcgtgcgcaaggtgttcgcggccacgcgggaggcgcaccgg
cgcggttacggcgtggggcggttctcgttcaacgtggcgggcgggcgctgcgagacctgt
cagggcgaggggttcgtgagcgtcgagctgctcttcctgccgagcacctatgccccgtgc
ccggactgcggcggggcgcgctacaaccccgagacgctcgaagtgacgtacagggaacgg
aatatcgcgcaggtgctggacctgacggtcgaggccgccgcggacttcttcgcggacact
ccggccgtcgcgcgcagcctcgccacgctcctcgatgtcggtctcggttatctgcggctc
ggccagccggcgaccgagctgtccggcggtgaggcgcagcgcatcaagctcgcgagcgaa
ctccagcgcgtacgccgaggtcacacgctctatctcctcgacgagccgacgaccggtctg
cacccggccgatgtcgaggtcctgatgcggcagttgcacggtctggtcgacggcgggcac
agcgtcgtggtcgtggagcacgacatggcggtggtggcgggcgcggactgggtggtcgac
ctggggccgggcggcggcgacgcgggaggccggatcgtggcgacgggacctccggcggag
gtcgcacgggcggcggcgagcgccacggctccgtacctcgcccgcgcgctgggcaccggg
ggctctcagtcccaatag

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