Streptomyces liliifuscus: JEQ17_07445
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Entry
JEQ17_07445 CDS
T08169
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
slf
Streptomyces liliifuscus
Pathway
slf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JEQ17_07445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slf03400
]
JEQ17_07445
DNA repair and recombination proteins [BR:
slf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JEQ17_07445
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JEQ17_07445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
DnaJ_CXXCXGXG
AAA_16
nSTAND1
AAA_33
HUTI_composite_bact
AAA_22
AAA_18
Viral_helicase1
MeaB
Motif
Other DBs
NCBI-ProteinID:
QQM39317
UniProt:
A0A7T7KUK9
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All DBs
Position
1710790..1713147
Genome browser
AA seq
785 aa
AA seq
DB search
MHSPHDPYVRVRGAREHNLQGVDVDIPRDVLAVFTGVSGSGKSSLAFGTIYAEAQRRYFE
SVAPYARRLIHQVGAPKVGDISGLPPAVSLQQRRSTPTSRSSVGTVTNLSNSLRMLFSRA
GDYPPGAERLDSDAFSSNTAVGACPECHGLGRVHRTTEESLVPDPTLSIREGAIAAWPGA
WQGKNLRDVLDALGYDVDRPWRELPAEQREWILFTDEQPVVTVHPVRDAQRIQRPYQGTY
MSARRYVMKTFSDSKSQTLRAKAERFLEAAPCPVCGGSRLRAEALAVTFADRTIAELAAL
PLVELADSLTGHGDSETARVLTEDLLARISPVTELGLGYLSLDRATPTLSAGELQRLRLA
TQLRSGLFGVVYVLDEPSAGLHPADTEALLTVLDRLKASGNSVFVVEHHLDVMRGADWLV
DVGPKAGEHGGQVLHSGPVAELEHVRESATARFLFDRSPVPVREVRAPRGQLKVGPVTRH
NLRGVTAEFPLGVLTAVTGVSGSGKSTLIGEITEDLPGVGRLVGVDQKPIGRTPRSNLAT
YTGLFDVVRKVFAATREAHRRGYGVGRFSFNVAGGRCETCQGEGFVSVELLFLPSTYAPC
PDCGGARYNPETLEVTYRERNIAQVLDLTVEAAADFFADTPAVARSLATLLDVGLGYLRL
GQPATELSGGEAQRIKLASELQRVRRGHTLYLLDEPTTGLHPADVEVLMRQLHGLVDGGH
SVVVVEHDMAVVAGADWVVDLGPGGGDAGGRIVATGPPAEVARAAASATAPYLARALGTG
GSQSQ
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcccccacgacccctacgtccgtgtgcgtggtgcgcgtgagcacaatcttcag
ggggtcgatgtcgatattccgcgggatgtgctggcggtcttcacgggggtgtccgggtcc
gggaagtcgtcgctcgccttcgggacgatctacgcggaggcgcagcggcggtacttcgag
tcggtggccccgtacgcgcgtcggctgatccatcaggtgggggcgccgaaggtcggggac
atcagcgggctgccgcccgcggtgtcgttgcagcagcggcggtcgacgccgacctcacgc
tcgtcggtcggtacggtcaccaacctctccaattcgcttcggatgctgttctcgcgtgcg
ggcgactatccgccgggggccgagcgtctcgactcggacgccttctcgtcgaacacggcc
gtcggggcctgtcccgagtgtcatgggctcggtcgggtgcaccgtacgaccgaggagtcg
ctggtccccgacccgacgctgtcgatccgcgagggcgcgatcgccgcgtggccgggcgcc
tggcaggggaagaacctgcgcgatgtcctcgacgcgctggggtacgacgtggaccggccg
tggcgcgaactgcccgccgagcagcgtgagtggatcctgttcacggacgagcagccggtc
gtgaccgtgcatccggtccgggacgcccagcggatccaacgcccgtaccagggcacgtac
atgagcgcgcggcgctatgtcatgaagaccttctcggactcgaagagtcagacgttgcgg
gccaaagccgagcggtttctggaggccgcgccctgtcccgtgtgcggcggcagtcggctg
cgggccgaggcgctcgcggtgacgttcgcagaccggaccatcgcggagctggccgcgctg
ccgctcgtcgaactggccgactccctcaccggtcatggtgattcggagaccgcccgcgtc
ctcaccgaggatctgctcgcgcgtatctcgccggtcaccgagctgggcctcggctatctc
agcctggaccgcgccacacccaccctttcggccggtgagctccaacggctgcggctggcc
acgcagttgcgctcggggctcttcggggtcgtgtacgtcctcgacgagccgtcggccgga
ctgcacccggcggacacggaggcgctgctgacggtcctcgaccggttgaaggcgtccggc
aactcggtgttcgtcgtggagcaccacctcgatgtcatgcgcggcgcagactggctcgtc
gacgtggggccgaaggcgggcgagcacggcggacaggtgctgcacagcggcccggtggcg
gagctggagcatgtcagggagtcggcgacggcccggttcctcttcgaccgctcccccgtc
ccggtacgtgaagtccgggcgccgcgcggccagttgaaggtcggcccggtgacacggcac
aacctgcgtggcgtgaccgccgagtttccgctcggcgtgctcaccgcggtcaccggcgtc
tccggctcgggcaagtccacgctcatcggcgagatcacggaggaccttccgggtgtgggg
cggctggtcggcgtcgaccagaagccgatcggccgtacgccccgctcgaatctggcgacg
tacacgggcctcttcgacgtcgtgcgcaaggtgttcgcggccacgcgggaggcgcaccgg
cgcggttacggcgtggggcggttctcgttcaacgtggcgggcgggcgctgcgagacctgt
cagggcgaggggttcgtgagcgtcgagctgctcttcctgccgagcacctatgccccgtgc
ccggactgcggcggggcgcgctacaaccccgagacgctcgaagtgacgtacagggaacgg
aatatcgcgcaggtgctggacctgacggtcgaggccgccgcggacttcttcgcggacact
ccggccgtcgcgcgcagcctcgccacgctcctcgatgtcggtctcggttatctgcggctc
ggccagccggcgaccgagctgtccggcggtgaggcgcagcgcatcaagctcgcgagcgaa
ctccagcgcgtacgccgaggtcacacgctctatctcctcgacgagccgacgaccggtctg
cacccggccgatgtcgaggtcctgatgcggcagttgcacggtctggtcgacggcgggcac
agcgtcgtggtcgtggagcacgacatggcggtggtggcgggcgcggactgggtggtcgac
ctggggccgggcggcggcgacgcgggaggccggatcgtggcgacgggacctccggcggag
gtcgcacgggcggcggcgagcgccacggctccgtacctcgcccgcgcgctgggcaccggg
ggctctcagtcccaatag
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