Streptomyces liliifuscus: JEQ17_11990
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Entry
JEQ17_11990 CDS
T08169
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
slf
Streptomyces liliifuscus
Pathway
slf03030
DNA replication
slf03430
Mismatch repair
slf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JEQ17_11990
03430 Mismatch repair
JEQ17_11990
03440 Homologous recombination
JEQ17_11990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slf03032
]
JEQ17_11990
03400 DNA repair and recombination proteins [BR:
slf03400
]
JEQ17_11990
Enzymes [BR:
slf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JEQ17_11990
DNA replication proteins [BR:
slf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JEQ17_11990
DNA repair and recombination proteins [BR:
slf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JEQ17_11990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
MtrC
Motif
Other DBs
NCBI-ProteinID:
QQM40119
UniProt:
A0A7T7I310
LinkDB
All DBs
Position
complement(2831362..2832084)
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AA seq
240 aa
AA seq
DB search
MGWHGELLVGFDLETTGTDPREARIVTGAVIEVRGTEPVGHREWLADPGVEIPADAVAVH
GISNERATADGRPADEVADAIASVLVSYWQSGVPVVAYNAAFDLTLLSAELRRYGLPSLR
DRLGGIDPAPVIDPYTIDRSVDRYRRGKRNLEAVCAEYGIALDSAHDASADALAAARLAG
AIAARHPKVAALGPAELHRRQIEWYAEWAADFQSFLRRKGDATAVVDGVWPLRDLTDERV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggttggcacggggaattgctggtcggcttcgacctggagacgaccgggacggatccg
cgcgaggcgcgcatcgtcaccggggccgtgatcgaggtcagggggacagagccggtcggg
caccgcgaatggctcgccgacccgggagtcgagatcccggcggacgcggtggcggtgcac
gggatcagcaacgaaagggcgacggccgacggcaggcccgccgatgaggtggccgacgcg
atcgcctcggtcctcgtctcgtactggcagtcgggcgtcccggtcgtggcgtacaacgcg
gccttcgacctgacgctgctctccgccgaactgcggcggtacggactgccgtcactgcgc
gaccggctcggcggaatcgaccccgcgccggtcatcgacccgtacacgatcgaccgctcc
gtggaccgctaccgccgcggcaagcggaacctcgaagcggtctgcgcggagtacggcatc
gcgctcgactccgcccacgacgcctcggcggacgccctggccgcggcccgtctcgccggc
gcgatagccgcccgccatcccaaggtcgccgccctcggcccggcggagctccaccgccgc
cagatcgagtggtacgcggaatgggcggccgacttccagagcttcctgcgccgcaagggg
gacgcgacggcggtggtggacggggtgtggccgctgcgggacctgacggacgagcgcgtc
tga
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