Streptomyces liliifuscus: JEQ17_13420
Help
Entry
JEQ17_13420 CDS
T08169
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
slf
Streptomyces liliifuscus
Pathway
slf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JEQ17_13420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slf03019
]
JEQ17_13420
03400 DNA repair and recombination proteins [BR:
slf03400
]
JEQ17_13420
Enzymes [BR:
slf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JEQ17_13420
Messenger RNA biogenesis [BR:
slf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JEQ17_13420
DNA repair and recombination proteins [BR:
slf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JEQ17_13420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
SWI2_SNF2
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QQM40377
UniProt:
A0A7T7I439
LinkDB
All DBs
Position
3186182..3188344
Genome browser
AA seq
720 aa
AA seq
DB search
MSNAELRTAADTVLARLVGAPAGDARLREDQWRAIEALVADKRRALVVQRTGWGKSAVYF
VATALLREQGAGPTVIVSPLLALMRNQVEAAARAGIRARTINSSNTEEWDTIQDEVAASE
VDVLLVSPERLNNPDFRDQVLPKLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTMLADL
PPGVPVLATTATANARVTADVAEQLGTGGSTDALVLRGPLDRESLSLGVLQLPDAAHRMA
WLAEHLGELPGSGIIYTLTVAAAEEVTAFLRQSGHTVASYTGKTENADRQQAEEDLLANR
VKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGKEDQA
IWQYFASIAFPPEEQVRRTLDVLAQAGRPLSLPALEPLVELRRSRLETMLKVLDVDGAVH
RVKGGWISTGDPWTYDTERYAWVAKQRAAEQQAMRDYVTTTGCRMEFLRRQLDDEGATPC
GRCDMCAGPRFTDAVSSSSLDSARGELGRAGVEVEPRKMWPTGLPAVGVDLKGRIPAGEQ
ATSGRALGRLSDIGWGNRLRPMLSPQAPDEPVPDDVAKAVVGVLADWAKGPGGWASGSPD
AQPRPVGVVTMASHGRPRLIQSLGARIAEVGRLPLLGSIEYAPGAGAAQVSRSNSAQRLK
ALDGALVVPPGLAATLAQAQGPVLLVDDSTETGWTLAVATRLLRRAGAQGVLPLVLAVQG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcagagctgcgcaccgcggccgacactgtcctcgcccgcctcgtcggcgcc
ccggcgggtgacgcccggctgcgcgaggaccagtggcgagccatcgaggcactggtcgcc
gacaagcgcagagccctggtcgtgcagcgcaccggctggggcaagtccgccgtgtacttc
gtggcgacggcgctgctgcgggagcagggcgcgggccccaccgtcatcgtctccccactc
ctcgccctcatgcgcaaccaggtcgaggcggccgcccgcgccggcatccgggcacggacc
atcaactcgtccaacacggaggaatgggacacgatccaggacgaggtggccgcgagcgag
gtggacgtcctcctggtgagccccgagcggctgaacaatccggacttccgcgaccaggtg
ctgcccaagctcgccgccgcgaccggcctcctcgtggtcgacgaagcacactgcatctcc
gactggggacacgacttccggccggactaccgccggctgcgcacgatgctcgcggacctc
ccgcccggcgtcccggtcctcgccaccaccgccacggccaacgcgcgcgtgacggccgat
gtcgccgagcagctgggcacaggtggcagcacggacgctctcgtcctgcgcggcccgctg
gaccgggagagcctgagcctcggtgtgctgcagctgcccgatgccgcacaccggatggcc
tggctggccgagcatctgggcgagctgcccggctccggaatcatctacacgctcacggtg
gccgcggccgaggaggtcaccgcgttcctgcggcagagcgggcacacagtggcctcgtac
accgggaagacggagaacgcggaccggcagcaggccgaggaggatctgctcgccaaccgc
gtcaaggccctcgtggccacgtcggcgctgggcatgggcttcgacaagcccgacctcggg
ttcgtggtgcacctggggtcaccgtcctcccccatcgcgtactaccagcaggtcggccgt
gcggggcgcggggtggagcatgccgaggtgctgctcctgccgggcaaggaggaccaggcg
atctggcagtacttcgcgtcgatcgcctttcctccggaggagcaggtccggcgcaccctg
gacgtcctcgcccaggcgggccgtccgctgtcgctgcccgcgctcgaacccttggtggag
ctgcgcaggtcacggctggagacgatgctcaaggtcctggacgtggacggcgcggtgcac
cgcgtcaagggcggctggatctccacgggcgacccgtggacgtacgacaccgagcgctat
gcctgggtcgccaagcagcgtgcggccgagcaacaggcgatgcgtgactacgtgacgacg
accggctgccgaatggagttcctgcggcgccagctggacgacgagggagccactccgtgc
ggtcgctgcgacatgtgcgctgggccccggttcaccgacgccgtctcctcgtcgtccctg
gactccgcgcgtggtgagctgggccgggcgggtgtcgaggtcgagccccggaagatgtgg
ccgacgggcctgcctgcggtcggtgtcgacctgaaggggcgcattccggccggtgaacag
gccacttccgggcgagccctgggacggctctcggacatcggctggggcaaccggctgcgg
ccgatgctctcgccccaggcccccgacgagcccgttccggacgatgtggcgaaggccgtg
gtcggtgtgctggccgactgggcgaagggtcccggcggctgggcttcgggaagccccgac
gcgcagccgcgcccggtcggtgtcgtcaccatggcctcgcacggccgaccgcgcctgatc
cagtcgctgggcgcacggatcgcggaggtcggacgcctgcccctgctgggttccatcgag
tacgcccccggagccggggcggcgcaggtgtccaggagcaacagcgcgcagcggttgaag
gccctcgacggggcgcttgtggtgccgcccggcctggccgccacgctggcccaggcccag
ggccccgtcctgctcgtggacgattcgaccgagaccggctggacgctggcggtggccacg
cgcctgctccggcgggccggtgcacagggggtgttgccgctggtccttgccgtgcaaggg
tga
DBGET
integrated database retrieval system
