Streptomyces liliifuscus: JEQ17_13805
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Entry
JEQ17_13805 CDS
T08169
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
slf
Streptomyces liliifuscus
Pathway
slf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JEQ17_13805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slf03019
]
JEQ17_13805
03016 Transfer RNA biogenesis [BR:
slf03016
]
JEQ17_13805
Enzymes [BR:
slf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JEQ17_13805
Messenger RNA biogenesis [BR:
slf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JEQ17_13805
Transfer RNA biogenesis [BR:
slf03016
]
Prokaryotic type
tRNA degradation factors
JEQ17_13805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QQM40445
UniProt:
A0A7T7KVQ3
LinkDB
All DBs
Position
complement(3288480..3290696)
Genome browser
AA seq
738 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKKPKEN
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALINGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIALVAGGAEAPTEEIVASGLDAAKPFIKVLC
KAQADLAAKAAKPTGEFPVFLDYQDDVLEALTAAVKSELSQALTIAGKQDREAELDRVKE
IAAEKLLPQFEGREKEISAAYRSLTKSLVRERVIKDKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPSREDFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEINGETHYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAAQGSQAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVVGVGSKVQVEIAEIDSRGKLSL
IPVIEGEGDDEKKDDTDK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtggagaatgagacccactacgccgaggccgttatcgacaacggaaccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtggcgtat
ctggacgacgacaccatggtgctgtcggccaccactgcctccaagaagcccaaggagaac
ctcgacttcttccccctcacggtggacgtcgaggagcgcatgtacgcggccgggaagatc
cccggttccttcttccgtcgtgagggccggccctctgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtcgccacgatcatggcgctcaaccccgaccacctgtacgacgtcgtggcgatcaacgcc
gcctccgcgtccacccagctggccggtctgcccttctccggcccgatcggcggcgtccgc
gttgcgctgatcaacggccagtgggtcgcgttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgccggtcgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatcgccctggtcgcgggcggcgccgaggctccg
accgaggagatcgtcgcctccggtctggacgccgcgaagcccttcatcaaggtgctctgc
aaggcccaggccgacctcgccgccaaggccgccaagcccaccggcgagttcccggtcttc
ctcgactaccaggacgacgtcctggaggccctgaccgccgcggtcaagagcgagctctcc
caggcgctcaccatcgccggcaagcaggaccgcgaggccgagctggaccgcgtcaaggag
atcgccgccgagaagctgctcccgcagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctgaccaagtccctggtccgtgagcgcgtcatcaaggacaaggtccgcatc
gacggccgtggcgtcacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccggatggagcagcagctggacaccctttccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccctactccgtgggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgctctcgccgagcgcgcgatcgtcccggtcctgccc
tcgcgcgaggacttcccgtacgcgatccgtcaggtgtccgaggccctcggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctcaacgccggtgtgccg
ctgaaggcccccgtcgccggtatcgccatgggcctgatctcccaggagatcaacggcgag
acgcactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaaggagttcgtgaccgccctccagctcgacaccaagctggac
ggcatcccggcctccgtcctggccgcggccctcaagcaggcccgtgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacacgccggacgagatgtccccgaacgccccg
cggatcatcacggtcaagatccccgtggacaagatcggtgaggtcatcggcccgaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
accatctacatcggtgccgcccagggctcgcaggccgaggccgcccgcgccacgatcaac
ggcatcgcgaacccgaccatgccggaggtcggcgagcgctacctgggcaccgtcgtgaag
acgacgaccttcggtgcgttcgtgtcgctgctcccgggcaaggacggtctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtggagaacgtcgaggacgtcgtcggc
gtgggctccaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctg
atccccgtgatcgagggcgaaggcgacgatgagaagaaggacgacaccgacaagtga
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integrated database retrieval system
