Streptomyces liliifuscus: JEQ17_14625
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Entry
JEQ17_14625 CDS
T08169
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
slf
Streptomyces liliifuscus
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slf03032
]
JEQ17_14625
03036 Chromosome and associated proteins [BR:
slf03036
]
JEQ17_14625
03400 DNA repair and recombination proteins [BR:
slf03400
]
JEQ17_14625
DNA replication proteins [BR:
slf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JEQ17_14625
Chromosome and associated proteins [BR:
slf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JEQ17_14625
DNA repair and recombination proteins [BR:
slf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JEQ17_14625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
QQM40592
UniProt:
A0A7T7KVV8
LinkDB
All DBs
Position
complement(3484780..3485424)
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AA seq
214 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAAEAVDAVLDAIVRAVVSGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLSGGASATVKK
AAAKKATAKKTAAKKTTAKRTVAKKTTAKKTTATAKKTTAKKTSAAAKKTTAKKTTAKKA
AAKKAPAKKAAAKKAPAKKSAARKTTAKKATARR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcgggcgtcagcaggcc
gcggaagcggtcgacgccgtactggacgccatcgtgcgtgcagttgtcagcggggaccgg
gtctcggtcaccggcttcggttccttcgagaaggtggaccgtccggcccgttacgcccgc
aacccgcagaccggggagcgcgttcgggtcaagaagacctcggtgccgcgcttccgtgcc
ggccagggcttcaaggacctggtgagcggctcgaagaagctgccgcgcggtggcgaggtc
gcggtcaagaaggccccgaagggcagcctgtccggcggcgcctccgcgacggtcaagaag
gccgccgccaagaaggccaccgccaagaagaccgcggcgaagaagaccaccgccaagagg
accgtcgcgaagaagacgacggccaagaagaccacggcgacggccaagaagacgaccgcc
aagaagacctcggcggccgccaagaagaccacggccaagaagaccaccgcgaagaaggcg
gcggcgaagaaggccccggcgaagaaggccgcggcgaagaaggcgccggccaagaagtcg
gcggcccgcaagaccaccgccaagaaggccaccgcccgcaggtag
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