KEGG   Streptomyces liliifuscus: JEQ17_14625
Entry
JEQ17_14625       CDS       T08169                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
slf  Streptomyces liliifuscus
Brite
KEGG Orthology (KO) [BR:slf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slf03032]
    JEQ17_14625
   03036 Chromosome and associated proteins [BR:slf03036]
    JEQ17_14625
   03400 DNA repair and recombination proteins [BR:slf03400]
    JEQ17_14625
DNA replication proteins [BR:slf03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    JEQ17_14625
Chromosome and associated proteins [BR:slf03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    JEQ17_14625
DNA repair and recombination proteins [BR:slf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      JEQ17_14625
SSDB
Motif
Pfam: Bac_DNA_binding HC2
Other DBs
NCBI-ProteinID: QQM40592
UniProt: A0A7T7KVV8
LinkDB
Position
complement(3484780..3485424)
AA seq 214 aa
MNKAQLVEAIADKVGGRQQAAEAVDAVLDAIVRAVVSGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLSGGASATVKK
AAAKKATAKKTAAKKTTAKRTVAKKTTAKKTTATAKKTTAKKTSAAAKKTTAKKTTAKKA
AAKKAPAKKAAAKKAPAKKSAARKTTAKKATARR
NT seq 645 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcgggcgtcagcaggcc
gcggaagcggtcgacgccgtactggacgccatcgtgcgtgcagttgtcagcggggaccgg
gtctcggtcaccggcttcggttccttcgagaaggtggaccgtccggcccgttacgcccgc
aacccgcagaccggggagcgcgttcgggtcaagaagacctcggtgccgcgcttccgtgcc
ggccagggcttcaaggacctggtgagcggctcgaagaagctgccgcgcggtggcgaggtc
gcggtcaagaaggccccgaagggcagcctgtccggcggcgcctccgcgacggtcaagaag
gccgccgccaagaaggccaccgccaagaagaccgcggcgaagaagaccaccgccaagagg
accgtcgcgaagaagacgacggccaagaagaccacggcgacggccaagaagacgaccgcc
aagaagacctcggcggccgccaagaagaccacggccaagaagaccaccgcgaagaaggcg
gcggcgaagaaggccccggcgaagaaggccgcggcgaagaaggcgccggccaagaagtcg
gcggcccgcaagaccaccgccaagaaggccaccgcccgcaggtag

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