Streptomyces liliifuscus: JEQ17_15925
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Entry
JEQ17_15925 CDS
T08169
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
slf
Streptomyces liliifuscus
Pathway
slf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
JEQ17_15925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slf03400
]
JEQ17_15925
DNA repair and recombination proteins [BR:
slf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
JEQ17_15925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
QQM40819
UniProt:
A0A7T7KWY3
LinkDB
All DBs
Position
complement(3790716..3791729)
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AA seq
337 aa
AA seq
DB search
MLHVRSIWNGAISFGLVSIPIKLVNATESHSISFRQIHLEDGGRIRYRKVCELEEREVSA
PEIGKAYEDADGSMIPITDEDLASLPIPTARTIEIVAFVPADRIDPLQMDTAYYLAANGV
PAAKPYTLLREALKRSQKVAIAKFALRGRERLGMLRVVDDVIAMHGLLWPDEIRTPESVA
PDSSVTVRDKELDLADALMDTLGEVDLNELHDDYREAVEELIAAKASGEKMPAAPSAEKG
GGKVIDLMAALESSVRQAKVARGEATSADSDADVKPIRKTPARKTSPKPASGKKSTAKKT
TAKKTAAAKKTTADSTKKSAAKKTPAKKSPPRKRASA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcacgtgcgatccatatggaacggcgccatctccttcggcctggtcagcatcccg
atcaagctcgtgaacgccaccgagagccactcgatctccttccgccagatccatctggag
gacggcggccgcattcgctaccgcaaggtgtgcgagctggaggagcgcgaggtgtcggcg
ccggagatcggcaaggcgtatgaggacgcggacgggtcgatgatcccgatcacggacgag
gacctggcgtccctgcccatcccgaccgcccggacgatcgagatcgtggccttcgtgccg
gccgaccggatcgatccgctccagatggacacggcgtactacctggcggcgaacggggtg
ccggcggccaagccgtacacgttgctgcgggaggcgctgaagcgcagccagaaggtcgcc
atcgcgaagttcgccctgcgggggcgtgagcggctcgggatgctgcgggtcgtcgacgac
gtcatcgcgatgcacgggcttctctggccggacgagatccgtacgcccgagagtgtcgcg
cccgactccagcgtcaccgtgcgggacaaggagctcgatctcgctgacgcgctgatggac
accctgggtgaggtggacctcaacgaactccacgacgactatcgcgaggccgtcgaggag
ctcatcgcggccaaggcctccggcgagaagatgccggccgcgccctccgccgagaagggc
ggcggcaaggtcatcgacctcatggccgcgctggagagcagcgtccgtcaggcgaaggtc
gcgcgcggggaggccacgtcggcggactccgacgcggacgtcaagcccatccgcaagacc
ccggcccgcaagacctcccccaagccggcctcgggcaagaagtcgacagccaagaagacg
accgcgaagaaaacggcggcagccaagaagacgacagccgactccacgaagaagtcagcc
gcgaagaaaaccccggcgaagaagtcgccccctcgcaagcgggcgtcggcctaa
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