Streptomyces liliifuscus: JEQ17_16720
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Entry
JEQ17_16720 CDS
T08169
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slf
Streptomyces liliifuscus
Pathway
slf03420
Nucleotide excision repair
slf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JEQ17_16720
03430 Mismatch repair
JEQ17_16720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slf03400
]
JEQ17_16720
Enzymes [BR:
slf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JEQ17_16720
DNA repair and recombination proteins [BR:
slf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JEQ17_16720
MMR (mismatch excision repair)
Other MMR factors
JEQ17_16720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QQM40954
UniProt:
A0A7T7KX17
LinkDB
All DBs
Position
complement(3957970..3961527)
Genome browser
AA seq
1185 aa
AA seq
DB search
MPARISDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIKAGVTDPDVIDPDNPPGEPVISTYHAFAGRLL
TDHGLRIGLEPTARLLADATRYQLAARVLREAPGPYPALTRSFPDLVSDLLTLDGELAEH
LVHPRDLRAYDAVLLRDLESVKLTNADLRKVPETAAARRELAELVGRYRAAKRERDLLDF
GDQIALSATLASTRPEVGGILRDEFRVVLLDEYQDTSVAQRILLAGLFGSGTGHPVTAVG
DPCQAIYGWRGASVANLDDFPEHFAHADGRPATRQSLSENRRSGGRLLDLANGLAEPLRA
LHAGVEALRPAPGAERDGMVRCALLRTHAEEMDWLADSIAHLVRTGKAPGEIAVLCRTAT
DFAEIQGALVARDIPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRI
GARDLALLGRRARLLVSHARVGADDDPDRRLAAAVEGIDPAEIISLADALDTFLETPLGG
HGDDDGLPFSADARVRFARLATELRDLRRSLSDPLMDVLHRVLATTGLEVELSASPHALA
ARRRETLSNFLDIAASFAANDGEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAH
KSKGLEWDVVAVPGLVTGTFPSSQGREKWTAQGKVLPHELRGDADTLPDIGAWDSRSMKA
FHEAMKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRGPSDFLQSLYEHCEAGH
GEIEAWADEPEETEENPALHEAGGDHAWPLPLDDAAMARRRAAAQTVLAHLESGHSHETA
HPSSHDAPESCDDPDWPPPPEDDELPYDEPLHDEPPFGEDIHEETDFTDESARGDWDSWT
TNRPRVPHPTPSPDAHLARSPDARPHPPETPRPASETRHLTPEEARTVASWDRDLDALAG
ELLRARESVTDVILPASLTASQLLRLAADPDAFAQELARPMPRPPQPAARRGTRFHAWVE
ARFEELRLPMLEPEELPGSEAEIADERDLEALKDAFERTPYAHRTPYRVEAPFQLAIAGR
VVRGRIDAVYKEDDGDRTTYEIVDWKTNRARNADPLQLALYRLAWAEQHGVPLDSVQAAF
LYVRSGEVVRPESLPDRAALERLLLEEPPDGVPEEPPDQHARVDG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgccagcccgtatctctgaccccgagcagctcaaggagctcctcggcatcccgttcacc
ccggagcagacggcctgcatcaccgcaccgcccgccccgcaggtgatcgtggccggcgcc
ggatccggcaagaccacggtgatggccgcgcgcgtggtgtggctggtcggcaccggacag
gtcgcgcccgaacaggtcctcggcctgaccttcaccaacaaggcggcgggcgaactcgcc
gagcgcgtacggaaagccctcatcaaggcgggcgtcaccgacccggacgtgatcgacccg
gacaacccgcccggcgagccggtcatctccacctaccacgccttcgcgggccgcctgctg
accgaccacggactgcgcatcgggctcgaacccaccgcgcgcctcctcgccgacgcgacc
cgctaccagctcgccgcacgcgtcctgcgcgaggcaccggggccctaccccgcgctcacc
cgctccttccccgacctggtcagcgacctcctcacgctcgacggcgagctcgccgaacac
ctcgtacacccccgggacctgcgggcctacgacgccgtactgctgcgggacctggagagc
gtcaagctcaccaacgccgacctgcgcaaggtccccgagacggccgccgcccggcgtgaa
ctggccgagctggtgggccgctacagggccgccaagcgcgagcgcgacctcctcgacttc
ggcgaccagatcgccctctccgcgaccctcgccagcacccgccccgaggtcggcggcatc
ctgcgcgacgagttccgcgtggtcctgctcgacgagtaccaggacacctccgtggcccag
cgcatcctcctggcgggcctgttcggcagcggcacgggccacccggtgaccgccgtcggt
gacccctgccaggcgatctacggatggcgcggcgcctccgtcgccaacctcgacgacttc
cccgagcacttcgcccacgccgacggccgcccagcgacccgccagtcgctcagcgagaac
cgccgcagcggcggccgcctcctcgacctcgccaacggcctcgccgagcccctgcgcgcc
ctccacgcgggcgtggaggccctccgcccggccccgggggccgagcgggacggcatggtg
cgctgcgccctgctgcgcacccacgccgaggagatggactggctcgccgactccatcgcc
catctcgtacgcaccggaaaggcgcccggtgagatcgccgtcctgtgccgcacggcgacc
gacttcgccgagatccagggcgcccttgtcgcccgcgacatccccgtggaggtcgtcggc
ctctccgggctgctgcacctccccgaggtcgccgacctggtcgccgtctgcgaggtcctc
caggacccgggcgccaacgcctcgctggtccgcctgctcaccggcccgcgctggcgcatc
ggcgcccgcgacctcgccctcctgggacgcagggcccgccttctcgtgtcgcacgcgcgc
gtgggggccgacgacgaccccgaccggcggctcgccgccgccgtcgagggcatcgaccct
gccgagatcatctcgctcgcggacgccctcgacacgttcctggagacacccctcggaggc
cacggggacgacgacggcctgcccttctccgccgacgcccgcgtacggttcgcacggctc
gccaccgaactgcgcgacctgcgccgctcgctctccgacccgctcatggacgtcctgcac
cgggtcctcgccaccaccggcctggaggtggagctctccgcgtccccgcacgccctggcg
gcccgccgacgcgagaccctctccaacttcctcgacatcgcagcctccttcgccgccaac
gacggcgaggccaccctcctcgccttcctcggcttcctgcgcaccgccgcccagtacgag
aagggcctcgacaacgccctgccgggcggcgagaacaccgtcaaggtgctcaccgcgcac
aagtccaagggcctggaatgggacgtcgtcgcggtccccggcctcgtcaccggcaccttc
cccagcagccagggccgcgagaaatggaccgcacagggcaaggtcctgccgcacgaactc
cgcggcgacgccgacaccctgccggacatcggcgcctgggactcccgcagcatgaaggcc
ttccacgaggccatgaaggaacaccagcacaccgaggaactccgcctcggctacgtcacg
ttcacccgcccccgctccctgctgctcggctcgggccactggtggggcccctcccagaag
aagccccgcggcccctccgacttcctgcagtccctgtacgagcactgcgaggccgggcac
ggcgagatcgaggcctgggcggacgaacccgaggagaccgaggagaaccccgcgctgcac
gaggcgggcggcgaccacgcctggccgctcccgctcgacgacgcggccatggcccgccga
cgcgcggccgcacagacggtcctggcccacctggaatccggccactcccacgagacggcc
cacccctcgtcccacgacgccccggagtcgtgcgacgacccggactggccgcctccaccc
gaggacgacgaactgccctacgacgaaccgctccacgacgagccccccttcggggaggac
atccacgaagagaccgatttcacagacgagtcagcccggggggactgggactcgtggacc
acgaaccgtcccagggttccgcaccccaccccgtccccggacgcacacctcgcccgctcc
ccggacgcgcgcccacaccctccggagacgccccgccccgcctccgagacgaggcacctc
accccggaggaagcccgcaccgtcgcctcctgggaccgcgacctggacgccctcgccgga
gagctcctgcgcgcccgcgaaagcgtcacggacgtcatcctgccggcctccctgaccgcc
tcccagctgctgcgcctggccgccgacccggacgccttcgcacaggaactcgcgcgcccc
atgccgcgcccgccccagccggccgcccgccgcggcacccgcttccacgcctgggtcgag
gcccgcttcgaagagctgcgcctgccgatgctggaaccggaggaactgcccggcagcgag
gccgagatcgccgacgaacgcgacctggaagccctcaaggacgccttcgaacgcaccccg
tacgcccaccgcaccccctaccgcgtcgaggcacccttccagctcgcgatcgccggacgc
gtcgtacggggccgcatcgacgccgtctacaaagaagacgacggcgacaggacgacgtac
gagatcgtcgactggaagaccaaccgcgcccgcaacgccgacccactccagctcgccctc
taccggctcgcctgggccgagcagcacggcgtacccctggattccgtacaggccgccttc
ctgtacgtgcgcagcggcgaggtcgtacgccccgagagcctgcccgaccgggccgcactg
gagcggctcctcctcgaagaaccacccgatggggtccccgaggaaccgccggaccagcac
gcgcgcgtggacggctag
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