Streptomyces liliifuscus: JEQ17_18765
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Entry
JEQ17_18765 CDS
T08169
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slf
Streptomyces liliifuscus
Pathway
slf03420
Nucleotide excision repair
slf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JEQ17_18765 (pcrA)
03430 Mismatch repair
JEQ17_18765 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slf03400
]
JEQ17_18765 (pcrA)
Enzymes [BR:
slf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JEQ17_18765 (pcrA)
DNA repair and recombination proteins [BR:
slf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JEQ17_18765 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
JEQ17_18765 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DEAD
ResIII
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-ProteinID:
QQM41301
UniProt:
A0A7T7KWN0
LinkDB
All DBs
Position
complement(4447103..4449595)
Genome browser
AA seq
830 aa
AA seq
DB search
MSSLFDDSFLADLKPSRAHEEEPPPPPEDEAPESEPVPDDLFGGHFDVPPSRDGYYRDGA
PRPHVDPAALLDGLNENQRAAVVHHGSPLLIVAGAGSGKTRVLTHRIAHLLGERKVHPGQ
ILAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKQLGFTSSFSIYDA
ADSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYA
MYQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVRE
LVGTSEHPVDVPPSEHDLPSAELCVVGDADQSIYAFRGATIRNILQFEEDYPNATTILLE
QNYRSTQTILTAANAVIERNESRRPKNLWTNAGAGAQITGYVADTEHDEAQFVADEIDRL
TDAGDAKAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLA
NPEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFAQALRRVDEAYGMASRSTNAVK
KFNTLMEDLRTIVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALE
FEQEAGEGEAPGGLSAFLERVALVADSDQIPDEEEDGSGVITLMTLHTAKGLEFPVVFLT
GMEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSSMRSAWGQPSYNPPSRFL
EEIPDTHLEWKRTGSLGPVSSGPVSGVAASLSSSRSRSAASGASGFATRRGATDKPVVSL
AVGDRVTHDQFGLGTVVGVKGTGANAEATVDFGEEKPKRLLLRYAPVEKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgatgacagcttcctggcggacctcaagccctcgcgggcccacgag
gaggagcccccgccgccgcccgaggacgaggcaccggagtcggagcccgttccggacgat
ttgttcggcggccacttcgacgtgccgccgagtcgggacgggtattaccgcgacggcgcc
ccccggccgcacgtggacccggccgcgctcctggacgggctgaacgagaaccagcgcgcg
gcggtggtccaccacggctcgccgctgctcatcgtggccggcgcgggctccggcaagacc
cgtgtgctcacgcatcgcatcgcccacctgctgggcgagcgcaaggtgcacccgggccag
atcctcgcgatcaccttcacgaacaaggccgcgggcgagatgaaggagcgcgtcgagcag
ctcgtcggcccgcgcgccaacgcgatgtgggtgatgacgttccacagcgcgtgtgtacgg
atcctgcggcgcgagtcgaagcagctcggcttcacctcctccttctcgatctacgacgcc
gccgacagcaagcgcctcatggccctggtctgccgtgacctggacctcgaccccaagcgc
ttcccgcccaagtcgttcagcgccaagatctcgaacctgaagaacgagctgatcgacgag
gaggacttcgccgcccaggccgccgacggcttcgagaagaccctcgcccaggcctacgcg
atgtaccagtcacgcctgcgcgaggcgaacgcgctggacttcgacgacctgattatgacg
acggtcaacctcctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccgg
cacgtcctggtcgacgagtaccaggacacgaaccacgcgcagtacgcccttgtgcgcgag
ctcgtcggcacctccgagcacccggtcgacgtaccgcccagtgagcacgacctcccgtcg
gcggagctgtgcgtggtgggtgacgcggaccagtcgatctacgccttccgcggcgcgacc
atccgcaacatcctccagttcgaggaggactacccgaacgcgacgacgatcctgctggag
cagaactaccgctcgacgcagacgatcctcaccgccgcgaacgcggtcatcgagcgcaac
gagtcgcgccgccccaagaacctgtggaccaacgcgggcgcgggcgcccagatcaccggc
tatgtcgccgacaccgagcacgacgaggcccagttcgtcgccgacgagatcgaccggctc
acggacgcgggcgacgcgaaggcgggcgacgtcgccgtcttctaccgtacgaacgcgcag
tcccgtgtcttcgaagaggtcttcatccgcgtcggcctgccctacaaggtcgtcggcggc
gtccgcttctacgagcgcaaggaggtccgtgacgtcctcgcgtacctgcgcgtgctcgcg
aaccccgaggactccgtaccgctccggcgcattctcaacgtccccaagcgcggcatcggc
gaccgcgccgaggcgatgatcgacgcgctctcccagcgcgagaagatcagcttcgcgcag
gcgctgcgccgcgtggacgaggcgtacggcatggcgtcccgctcgacgaacgccgtcaag
aagttcaacaccctgatggaggacctccgcacgatcgtcgagtcgggcgccggcccggcg
acggtccttgaggcggttctcgaacggaccggctacctcgccgagttgcaggcctcgacc
gacccgcaggacgagacccgcatcgagaacctccaggaactggccgccgtggccctggag
ttcgagcaggaggccggcgagggtgaggcaccgggcgggctctccgccttcctggagcgg
gtcgcgctcgtcgccgactccgaccagatcccggacgaggaggaggacgggtccggcgtg
ataacgctgatgaccctccacaccgccaagggcctcgaattccccgtggtgttcctgacc
ggcatggaggacggcgtcttcccgcacatgcgcgccctcggccagaccaaggagctggag
gaggagcgcaggctcgcgtacgtcggcatcacgcgcgcgcgggagcggctgtatctcacc
cgctcctcgatgcgcagcgcttggggccagccctcgtacaacccgccgtcccgcttcctg
gaggagatcccggacacgcatctggagtggaagcgcacgggctccctgggcccggtctcc
tccggcccggtgtccggcgtggcggcctccctgtcctcctcgcgctcccgctcggccgcc
tcgggcgcgtccggcttcgccacccgacgcggcgccaccgacaagccggtggtgtccctc
gcggtcggcgaccgcgtcacccatgaccagttcggcctcggcacggtcgtcggggtgaag
ggcaccggtgcgaacgcggaggcgacggtcgacttcggcgaggagaagccgaagaggctg
ctgctgcggtacgcgccggtggagaagctgtag
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