Streptomyces liliifuscus: JEQ17_19100
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Entry
JEQ17_19100 CDS
T08169
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
slf
Streptomyces liliifuscus
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slf03021
]
JEQ17_19100
Transcription machinery [BR:
slf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JEQ17_19100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_24
MarR_2
Sigma70_ECF
HTH_3
MarR
DUF7343
IF2_N
GerE
DUF1492
Motif
Other DBs
NCBI-ProteinID:
QQM41360
UniProt:
A0A7T7KWM8
LinkDB
All DBs
Position
4529954..4530853
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AA seq
299 aa
AA seq
DB search
MSPRLDASQTQRATSTPPLERLEDESADENVGLAGLPEIPPFDEVGPVDARALSKTLFER
LESLEEGTHEYSYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAIDRFEL
SRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQQLDRAPTVG
ELAERLGLSNDEVVEGMAASNAYTASSLDAQPEEDDSEGALADRIGYEDHGLEGIEYVES
LKPLIAELPPRDRQILSLRFVANMTQSEIGDELGISQMHVSRLLSRTLVRLRRGLTVEE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgcatcgcagacccagagggcgacgtcgacaccccctctggaa
cgactggaagacgagtccgccgacgagaacgtcggcctcgccggacttccggagatcccg
cctttcgacgaggtcgggccagtggacgcacgggccctgtccaagaccctcttcgagcgg
ctggagtcgctggaagaaggcacccacgagtactcgtacgtacgcaacaccctggtcgaa
ctcaatctcgccctggtgaagttcgccgcctcccggttccgctcccgcagtgagccgatg
gaggacatcatccaggtcggcacgatcggcctgatcaaggcgatcgaccggttcgagctc
agccgtggcgtcgagttcccgaccttcgcgatgccgaccatcgtcggcgagatcaagcgc
ttcttccgcgacacctcgtggtccgtgcgggtaccgcgccgactgcaggaactccgcctc
gacctggccaaggcgggcgacgaactcgcgcagcaactggaccgcgctccgacggtggga
gagctggcggagcgtctggggctgtcgaacgacgaggtcgtcgagggcatggccgcgtcg
aacgcctatacggcaagctcgctcgacgcccagcccgaggaggacgactccgagggcgcg
ctggcggaccggatcggctacgaggaccacgggctcgaaggcatcgagtacgtcgagtcg
ttgaagccgctgatcgccgaactcccgccgcgcgaccggcagatcctgtccctgcggttc
gtcgccaacatgacgcagtccgagatcggtgacgagctcggcatctcgcagatgcacgtc
tcgcggctgctctcgcggacgctggtgcggctgcgcaggggactgaccgtcgaggagtga
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