Streptomyces liliifuscus: JEQ17_21050
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Entry
JEQ17_21050 CDS
T08169
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
slf
Streptomyces liliifuscus
Pathway
slf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JEQ17_21050
09124 Replication and repair
03420 Nucleotide excision repair
JEQ17_21050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slf03021
]
JEQ17_21050
03400 DNA repair and recombination proteins [BR:
slf03400
]
JEQ17_21050
Enzymes [BR:
slf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JEQ17_21050
Transcription machinery [BR:
slf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
JEQ17_21050
DNA repair and recombination proteins [BR:
slf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
JEQ17_21050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
ETAA1
IMD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QQM41692
UniProt:
A0A7T7I691
LinkDB
All DBs
Position
4991509..4993152
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHELADECRRSIAPFAELERAPEHIHTYRLTPLGLWNARAAGH
DAEQVVDALVQYSRYPVPHALLVDIAETMDRYGRLTLSKDPAHGLVLTTTDRPVLEEILR
SKRVIPLVGARIDPDTVAVHPSERGQIKQTLLRLGWPAEDLAGYVDGEAHPIELAEDGWA
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAKATTLILVTNTVSARQWKHEL
VKRTSLTEEEIGEYSGTRKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDAERLAYATAETEEKYRFCATTATKRKVTEALVRRFAGQQILVIGQYIDQ
LDELGEHLDAPVIKGETSNAQREKLFEAFRQGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DELLADS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggtccactcatcgtccagtccgacaagacgctgctcctggaggtcgaccacgag
ctggccgacgagtgccgtcgttccatcgcgcccttcgcggagctggagcgggcgccggag
cacatccacacctaccggctgacgccgctcgggctgtggaacgcgcgggcggccgggcac
gacgccgagcaggtcgtggacgcgctcgtgcagtacagccgttacccggtgccgcacgcg
ctgctggtcgacatcgccgagacgatggaccgctacggccgcctgacgctgagcaaggac
ccggcgcacgggctcgtcctcacgaccaccgaccggcccgtgctggaggagatcctccgc
tcgaagcgcgtcattccgctggtcggcgcccggatcgaccctgacacggtcgccgtgcac
ccctccgagcgcggccagatcaagcagacgctgctgaggctgggctggccggccgaggac
ctcgccgggtacgtggacggcgaggcgcatcccatcgagctggccgaggacggctgggcg
ctgcggccgtaccagaagcaggcggtggagaacttctggcacggcgggtcgggggtcgtc
gtactcccctgtggcgccggaaagacgctggtcggcgccgggtccatggcccaggccaag
gccaccacgctcatcctcgtcacgaacaccgtctccgcccggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggaggagatcggggagtacagcggtacgcggaaggag
atccggccggtcaccatcgcgacgtaccaggtcctgacgacgaagcggaagggtgtctat
ccgcacctggagctgttcgactcccgcgactggggtctgatcgtctacgacgaggtgcat
ctgctgcccgcgccggtcttcaagttcacggcggacctgcaggcgcgtcggcggctgggt
ctgacggccacgctggtgcgggaggacggccgtgagtcggacgtgttctcgctgatcggc
ccgaagcgtttcgacgctccttggaaggagatcgaagcgcaggggtacatcgcgcccgcg
gactgtgtggaggtccgcgtcaatctcacggacgccgagcgcctcgcgtacgcgaccgcc
gagacggaggagaagtaccgcttctgcgcgacgaccgcgacgaagcggaaggtgacggag
gcgctggtgcggcggttcgccgggcagcagatccttgtcatcgggcagtacatcgaccaa
ctcgacgagctgggcgagcacttggacgcgcccgtcatcaagggtgagacgtcgaacgcg
cagcgcgagaagctcttcgaggcgtttcggcagggcgagatcagtgtgctcgtggtgtcg
aaggtggcgaacttctcgatcgacctgccggaggcgaccgtcgcgatccaggtgtcgggg
acgttcgggtcccgccaggaggaggcgcagcggctcgggcgggtgctgcggccgaaggcc
gacgggcaccaggcgcacttctactcggtggtggctcgggacacgatcgatcaggacttc
gcggcgcatcggcagcggttcttggctgagcaggggtatgcgtatcgcatcgtggatgcg
gatgagttgcttgcggacagctga
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