Streptomyces liliifuscus: JEQ17_23515
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Entry
JEQ17_23515 CDS
T08169
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
slf
Streptomyces liliifuscus
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slf03032
]
JEQ17_23515 (gyrB)
03400 DNA repair and recombination proteins [BR:
slf03400
]
JEQ17_23515 (gyrB)
Enzymes [BR:
slf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JEQ17_23515 (gyrB)
DNA replication proteins [BR:
slf03032
]
Prokaryotic type
DNA Topoisomerases
JEQ17_23515 (gyrB)
DNA repair and recombination proteins [BR:
slf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JEQ17_23515 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QQM42120
UniProt:
A0A7T7I6W7
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All DBs
Position
5494084..5496144
Genome browser
AA seq
686 aa
AA seq
DB search
MADSGNPNENIPSTDAGANGGATSSNGEVTASYDASAITVLEGLDAVRKRPGMYIGSTGE
RGLHHLVYEVVDNSVDEALAGHADTIEVTILPDGGVRVVDNGRGIPVGIVASEGKPAVEV
VLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTKVAVEIRTDGHRWTQDYKLGVPTAP
LAQHEAIDETGTSVTFWADGDIFETTDYSFETLSRRFQEMAFLNKGLTIKLTDERDSAKA
TVGADEAGADEPEEVKTVTYHYEGGIVDFVTYLNSRKGEVVHPTVIDIEAEDKERMLSLE
VAMQWNGGYSEGVYSFANTIHTHEGGTHEEGFRAALTGLINRYARDKKLLREKDDNLTGD
DIREGLTAIISIKLGEPQFEGQTKTKLGNTEAKTFVQKVVHEHISDWLDRNPNEAADIIR
KSIQAATARVAARKARDLTRRKGLLETASLPGKLSDCQSNDPTKCEIFIVEGDSAGGSAK
SGRNPEYQAILPIRGKILNVEKARIDKILQNQEIQALISAFGTGVHEDFDIAKLRYHKII
LMADADVDGQHINTLLLTFLFRFMRPLVEAGHVFLSRPPLYKIKWGRDDFEYAYSDRERD
ALIELGRQAGKRIREDSIQRFKGLGEMNAEELRITTMDQEHRVLGQVTLDDAAQADDLFS
VLMGEDVEARRAFIQRNAKDVRFLDI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggccgattccggcaaccccaacgagaacatcccgtccaccgacgccggcgcgaacggc
ggggccacatcctcgaacggcgaggtcacggcctcgtacgacgccagcgccatcaccgtc
ctcgagggtctggacgcggtccgcaagcgacccggcatgtacatcggctcgaccggtgag
cgtggtcttcatcaccttgtgtacgaggtggtcgacaactccgtcgacgaggcgctggcc
gggcacgccgacacgatcgaggtcacgatcctccccgacggcggcgtccgcgtcgtcgac
aacggccgcggcatcccggtgggcatcgtcgcctccgagggaaagcccgccgtcgaggtc
gtgctgaccgtgctgcacgcgggcggcaagttcggcggcggcggctacgcggtctccggc
ggtctgcacggcgtgggcgtctccgtcgtgaacgcgctgtccaccaaggtggccgtcgag
atcaggaccgacggacaccgctggacgcaggactacaagctgggcgtgccgacggctccg
ctggcccagcacgaggccatcgacgagaccggcacgtcggtcaccttctgggccgacggg
gacatcttcgagaccacggactactccttcgagacgctctcgcggcgcttccaggagatg
gcgttcctcaacaagggtttgacgatcaaactcactgatgagcgcgactcggcgaaggcc
acggtgggcgccgacgaggcgggtgcggacgagcccgaagaggtcaagaccgtcacgtac
cactacgaaggcggcatcgtcgacttcgtgacgtacctcaactcccgcaagggcgaggtc
gtccaccccaccgtgatcgacatcgaggccgaggacaaggagcgcatgctctccctcgag
gtcgcgatgcagtggaacggcggttacagcgagggcgtgtactccttcgccaacaccatc
cacacccatgagggcggtacgcacgaggagggcttccgcgcggcgctcaccggtctcatc
aaccggtacgcgcgcgacaagaagctgctgcgcgagaaggacgacaacctcacgggtgac
gacatccgcgagggtctgacggcgatcatctcgatcaagctcggcgagccgcagttcgag
ggccagaccaagaccaagctgggcaacaccgaggcgaagaccttcgtccagaaggtcgtc
cacgagcacatcagcgactggctggaccgcaatccgaacgaggccgcggacatcatccgc
aagtccatccaggcggccaccgcgcgcgtggcggcccgcaaggcccgtgacctcacccgt
cgcaaggggctcctggagacggcgtcgctgccgggcaagctgagcgactgccagtcgaac
gaccccaccaagtgcgagatcttcatcgtcgagggtgactccgccggcggctcggccaag
tccggccgcaacccggagtaccaggcgatcctcccgatccggggaaagatcctcaacgtc
gagaaggcgcggatcgacaagatcctgcagaaccaggagatccaggcactgatctccgcc
ttcggaaccggagtccacgaggacttcgacatcgcgaagctccgctatcacaagatcatc
ctgatggcggacgccgacgtcgacggacagcacatcaacaccctgctgctgaccttcctg
ttccgcttcatgcggccgctggtcgaggccgggcacgtgttcctgtcgcgtccgccgctc
tacaagatcaagtggggccgggacgacttcgagtacgcgtactcggaccgtgagcgcgac
gccctgatcgagctcggccgccaggcgggcaagcgcatcagggaggactcgatccagcgc
ttcaagggtctcggtgagatgaacgccgaggagctgcgcatcaccacgatggaccaggag
caccgcgttctcggtcaggtcacgctcgacgacgccgcccaggccgacgacctgttctcg
gtcctgatgggcgaggacgtcgaggcacgccgcgcgttcatccagcgcaatgccaaggac
gtccgcttcctcgacatctga
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