Streptomyces liliifuscus: JEQ17_24045
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Entry
JEQ17_24045 CDS
T08169
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
slf
Streptomyces liliifuscus
Pathway
slf00040
Pentose and glucuronate interconversions
slf01100
Metabolic pathways
slf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
JEQ17_24045
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JEQ17_24045
Enzymes [BR:
slf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
JEQ17_24045
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QQM42210
UniProt:
A0A7T7I720
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Position
5608273..5609616
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AA seq
447 aa
AA seq
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MASPSHRRSLRKRRTALLSVAAVAAAGLGAVPFVMNANAGAVDLAHQALPAKDGWAASGS
GTTGGSKADSAHTFTVSTRAQLVKALGSATDSTPKIIKIKGTIDANTDDAGKKLTCADYA
SGTGYSLSAYLKAFDPATYGKKAPSGTQEKARAAAQTKQKKNIVFRVPANTTVVGVPGTK
AGITGGSLQVQDVDNVIIRNLSLTATEDCFPQWDPTDGSAGEWNSNYDSVTLRGATHVWA
DHNTFSDAPFFDKSEQTHFGRKYQVHDGALDITNGSDLVTVERNQFTNHDKTMLIGSSDT
DSVGKLRVSIHHNVWKGITQRAPLARIGQIHLYNNVYDTTTLNGYAPKYSLDSRAKAQVV
AEHNSWTLPSGAKVAKLLSGDGTGSVAGTGNLVNGKSTDLVAAYNSANSKKLKTTVNWKP
TLTSGLQTSATTLPTELLKTTGAGVLS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtggcatccccctcccaccgcaggtccctccgcaagcggcgcaccgctcttctctccgtc
gccgccgtggcggccgcgggtctcggcgccgtccccttcgtgatgaacgcgaacgcgggt
gccgtcgacctggcgcaccaggccctgcccgccaaggacggctgggcggcgtccggttcg
ggcacgaccggcggttcgaaggccgactccgcgcacaccttcaccgtcagcacccgggcc
cagctggtgaaggcgctcggctcggcgaccgattccaccccgaagatcatcaagatcaag
ggcacgatcgacgccaacacggacgacgcgggcaagaagctgacctgcgccgactacgcc
tcaggcacgggctattcactctcggcgtatctgaaggcgttcgacccggccacgtacggg
aagaaggcgccctcgggcacgcaggagaaggcacgcgcggccgcccagaccaagcagaag
aagaacatcgtcttccgggtcccggccaacaccaccgtcgtgggcgtcccgggcaccaag
gccgggatcaccggcgggagtctgcaggtgcaggatgtcgacaacgtcatcatccgcaac
ctctccctcaccgcaaccgaggactgcttcccgcagtgggatccgacggacggttccgcc
ggcgagtggaactccaactacgactcggtgacgctgcgcggcgcgacccatgtgtgggcg
gaccacaacacgttcagcgacgcaccgttcttcgacaagtcggagcagacccacttcggc
cgcaagtaccaggtccacgacggcgccctcgacatcaccaacggctcggacctggtgacc
gtcgagcgcaaccagttcaccaaccacgacaagacgatgctgatcggcagcagcgacacc
gacagcgtcggcaagctgcgcgtctccatccaccacaacgtgtggaagggcatcacccag
cgcgccccgctggcccgcatcggccagatccacctctacaacaacgtctacgacacgacg
accctcaacgggtacgcccccaagtacagcctcgactcccgtgccaaggcccaggtggtg
gcggagcacaactcctggaccctgccgtccggtgcgaaggtcgccaagctcctgagcggc
gacggcacgggctcggtcgccggcaccggcaacctcgtcaacggcaagtccacggacctg
gtcgccgcgtacaactcggcgaactcgaagaagctgaagaccacggtcaactggaagccg
accctgacgtcaggcctccagacctcggcgaccaccctgccgacggaactgctgaagacg
acgggagcgggggttctttcctga
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