Streptomyces liliifuscus: JEQ17_29600
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Entry
JEQ17_29600 CDS
T08169
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
slf
Streptomyces liliifuscus
Pathway
slf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JEQ17_29600 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slf03019
]
JEQ17_29600 (orn)
03009 Ribosome biogenesis [BR:
slf03009
]
JEQ17_29600 (orn)
Messenger RNA biogenesis [BR:
slf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JEQ17_29600 (orn)
Ribosome biogenesis [BR:
slf03009
]
Eukaryotic type
Pre-60S particles
RNases
JEQ17_29600 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QQM43153
UniProt:
A0A7T7RDV4
LinkDB
All DBs
Position
complement(6845585..6846187)
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AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPDASLETMPDVVR
QMHTSSGLLSELAGGTTLADAEEQVLTYIREHVKEPGKAPLCGNSVGTDRGFLLRDMATL
EEYLHYRIVDVSSVKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAIFVPQ
PGPDSDTARSIASKHVLPAG
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggtctctcgctgtcggacgac
gcgctcatcgaggtggccgcgctggtgaccgactctgagctgaacgtactcggcgagggg
gtggacatcgtgatccgcccgccggacgcctcgctggagacgatgccggacgtggtgcgc
cagatgcacacgtcctccggcctcctctccgagctggccggtggcacgaccctggcggac
gcggaggagcaggtcctcacctatatccgtgagcacgtcaaggaaccgggcaaggccccg
ctgtgcgggaactcggtcggcacggaccgcggcttcctcctccgtgacatggcgaccctg
gaggagtacctccactaccgcatcgtggacgtctcctccgtcaaggagctggcccgccgc
tggtacccccgggcgtacttcaacagcccggagaagaacggcaaccaccgcgcgctcgcc
gacatccgcgaatccatcgcggagctccgctactaccgcgaggcgatcttcgtcccgcag
cccggccccgactcggacacggcccgcagcatcgcctcgaagcacgtcctacctgcggga
tag
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