Streptomyces liliifuscus: JEQ17_31025
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Entry
JEQ17_31025 CDS
T08169
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
slf
Streptomyces liliifuscus
Pathway
slf03030
DNA replication
slf03430
Mismatch repair
slf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JEQ17_31025 (holA)
03430 Mismatch repair
JEQ17_31025 (holA)
03440 Homologous recombination
JEQ17_31025 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slf03032
]
JEQ17_31025 (holA)
03400 DNA repair and recombination proteins [BR:
slf03400
]
JEQ17_31025 (holA)
Enzymes [BR:
slf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JEQ17_31025 (holA)
DNA replication proteins [BR:
slf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JEQ17_31025 (holA)
DNA repair and recombination proteins [BR:
slf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JEQ17_31025 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QQM43393
UniProt:
A0A7T7RE81
LinkDB
All DBs
Position
7201668..7202654
Genome browser
AA seq
328 aa
AA seq
DB search
MARNSAQDNPLAPVTIAVGQEDLLLDRAVREVVVAARAADADTDVRDLTSDQLQPGTLDE
LTSPSLFAERKVVVVRNAQDLSADTIKDVKAYLGAPAEEITLVLLHAGAAKGKGLLDAAR
KAGAREVACPKMTKPADRLAFVRSEFRALGRSATPEACQALVDSIGSDLRELASAVTQLV
SDIEGTIDEAVVGRYYTGRAEASSFTVADRAVEGRAAEALEALRWSLSTGVAPVMITSAL
AQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVSVALRAVAEADAG
VKGGGDDPEYALEKAVVAIARAARARRG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaactctgcacaggacaacccgctcgcccccgtcacgatcgccgtcgggcag
gaggacctcctgctcgaccgcgccgtgcgggaggtggtggtcgccgcgcgggccgccgac
gcggacacggatgtacgggacctcacgtcggaccagttgcagccgggcacgctcgacgag
ctgaccagtccgtcgctcttcgcggagcgcaaggtcgtcgtggtgcgcaatgcccaggat
ctgtcggccgacacgatcaaggacgtgaaggcgtatctgggcgcccccgccgaggagatc
acgctcgtgctgttgcacgcgggcgcggccaagggcaaggggctgctcgatgccgcgcgc
aaggcgggtgcgcgggaggtcgcctgccccaagatgacgaagccggcggatcggctggcc
ttcgtgcggagcgagttccgggcgctggggcggtccgccacgcctgaggcctgccaggcc
cttgtcgactccatcgggagcgatttgcgggagctggcgtcggccgtgacgcagctcgtg
tcggacatcgaggggacgatcgacgaggccgtcgtcggccggtactacacgggtcgggcc
gaggcctccagcttcacggtggcggatcgggcggtcgaggggcgggcggcggaggcgttg
gaggctctgcggtggtctctgtccaccggggtcgcgcctgtgatgatcacgagtgcgttg
gcgcagggggtgcgggccatcgggaagctgtcgtcggctcgtggggggcggcctgctgat
cttgctcgggagttggggatgccgccctggaagatcgatcgggtgcggcagcagatgcgg
gggtggaccccggacggggtttctgttgcgcttcgggcggtcgcggaggccgatgccggg
gtcaaggggggtggtgacgatcctgagtacgcccttgagaaggccgtcgtcgccattgcc
cgggcggcccgcgcgcgccgcggctag
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