Streptomyces liliifuscus: JEQ17_34970
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Entry
JEQ17_34970 CDS
T08169
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
slf
Streptomyces liliifuscus
Pathway
slf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JEQ17_34970 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slf03400
]
JEQ17_34970 (uvrA)
DNA repair and recombination proteins [BR:
slf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JEQ17_34970 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JEQ17_34970 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
nSTAND1
AAA_25
AAA_16
AAA_33
AAA_23
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
BCA_ABC_TP_C
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QQM44092
UniProt:
A0A7T7L0B5
LinkDB
All DBs
Position
8114761..8117832
Genome browser
AA seq
1023 aa
AA seq
DB search
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPITRQSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFSDLQTKGYSRARV
DGETIQLTEPPTLKKQEKHTIEVVIDRLTVKEGAKRRLTDSVETALGLSGGMVVLDFVDL
PADDPERERMYSEHLYCTYDDLSFEELEPRSFSFNSPFGACPDCTGIGTRMEVDPELIVP
DEDKSLDEGAIHPWSHGHTKDYFGRLIGALADALGFRTDIPFAGLPQRAKKALIHGHKTQ
IEVRYRNRYGRERVYTTPFEGAVPFVKRRHSEAESDASRERFEGYMREVPCPTCQGTRLK
PVVLAVTVMEKSIAEVSAMSISDCADFLGELKLDARDKKIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKVADWIVDIGPGAGEHGGRVVHSGSLKELLANDESQTGQYLSGK
KAIPLPDIRRPHDPSRQLTVHGARENNLQDIDVSFPLGVLTAVTGVSGSGKSTLVNDILY
THLARELNGARSVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETTEAKVRGYMPGRFSFNVKGGRCENCAGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
DVHYKGKSIADILNMPIEEGMHFFEAVPAISRHLKTLNDVGLGYVRLGQSATTLSGGEAQ
RVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLLTVLSGLVDKGNTVIVIEHNLDVIK
TADWVVDMGPEGGGGGGLVIAEGTPEEVAGVPASHTGKFLREVLGAERVSDASEVKAPRK
TAAKKAVAARSTTKKTATAKTTTARATTKATTEKAANNTATKKAAAVTKKATPAKKTTRA
RKA
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggagcgcgcgagcacaatctcaagaatgtctcgctc
gacctcccgcgcgactcgctcatcgtcttcacgggcctgtcggggtcgggcaagtcctcg
ctggccttcgacacgatcttcgccgagggccagcggcgctacgtggagtcgctctcctcg
tacgcccggcagttcctcggccagatggacaagccggatgtcgacttcatcgaaggcctc
tccccggcggtctccatcgaccagaagtcgacctcgcgcaacccgcgctcgacggtcggc
accatcaccgaggtctacgactatctgcgactgctcttcgcgcgcatcggcaagccgcac
tgccccgagtgcgggcgcccgatcacgcgccagtcgccgcaggccatcgtcgacaaggtc
ctggagctgccggagggaagccgcttccaggtcctgtcgccgctggtgcgcgagcgcaag
ggcgagttcgtcgacctcttctccgatctccagaccaagggctacagccgcgcccgggtc
gacggcgagacgatccagctcaccgagccgcccacactgaagaagcaggagaagcacacc
atcgaggtggtcatcgaccgtctcacggtcaaggagggcgccaagcgccgtctgaccgac
tccgtggagaccgccctcggtctctccggcggcatggtggttctcgacttcgtcgacctc
cccgccgacgaccccgagcgcgagcgcatgtactcggagcacctgtactgcacgtacgac
gacctgtccttcgaggagctggagccccgctccttctccttcaactcgcccttcggcgcc
tgcccggactgcacgggcatcggcacgcgcatggaggtcgacccggagctgatcgtcccg
gacgaggacaagtccctcgacgagggcgccatccacccctggtcgcacggccacaccaag
gactacttcggacgcctcatcggagccctcgcggacgcgttgggattccggaccgacatc
cccttcgccggtcttccgcagcgcgccaagaaggcactgatccacggacacaagacgcag
atcgaggtccgctaccgcaaccggtacggcagagagcgtgtgtacaccacgcccttcgaa
ggggccgtccccttcgtgaagcgccggcacagcgaggcagagagcgacgcgagccgcgag
cgcttcgagggctacatgcgcgaggtgccctgccccacctgtcagggcacgcgcctcaag
ccggtcgtcctcgcggtcacggtcatggagaagtccatcgccgaggtctccgcgatgtcc
atcagcgactgcgcggacttcctgggcgagctgaagctcgacgctcgtgacaagaagatc
gccgagcgcgtcctgaaggaggtcaacgaacgactgcggttcctggtcgacgtaggcctg
gactacctctcgctcaaccgcgccgcgggcaccctctccggcggcgaggcccagcgcatc
cgcctggcgacccagatcggctcgggcctggtcggcgtgctgtacgtgctggacgagccc
tccatcggcctgcaccagcgcgacaaccaccggctcatcgagaccctggtccggctgcgc
gacatgggcaacacgctcatcgtcgtcgagcacgacgaggacaccatcaaggtcgccgac
tggatcgtcgacatcggtcccggcgcgggcgagcacggcggcagggtcgtgcacagcggt
tccctgaaggagctgctcgccaacgacgagtcgcagaccggtcagtacctgtccggcaag
aaggccatcccgctgcccgacatccggcgcccgcacgacccgtcccggcagctcacggtg
cacggcgcccgcgagaacaacctgcaggacatcgacgtgtcgttcccgctgggcgtcctc
acggccgtcacgggagtctccggatccggcaagtccacgctggtcaacgacatcctgtac
acgcatctggcccgcgagctgaacggcgccaggagcgttcccgggcggcatacgcgcgtg
gacggcgacgacctcgtcgacaaggtcgtgcacgtcgaccagtcgcccatcggccgcacc
ccgcggtcgaacccggcgacgtacaccggagtcttcgaccacgtccgcaagctgttcgcc
gagacgaccgaggcgaaggtccgcggctacatgcccggccgtttctccttcaacgtcaag
ggcggccgctgcgagaactgcgcgggcgacggcacgatcaagatcgagatgaacttcctc
ccggacgtgtacgtcccgtgcgaggtctgccacggtgcccgctacaaccgggagaccctg
gacgtccactacaagggcaagtccatcgccgacatcctgaacatgccgatcgaggaaggc
atgcacttcttcgaggcggtcccggcgatctcccgccacctcaagacgctgaacgacgtc
ggcctcggctatgtccggctcggccagtccgcgacgaccctgtccggcggtgaggcccag
cgggtgaagctcgccagcgagctccagaagcgctccaccggacgcacggtgtacgtcctg
gacgagccgaccaccggtctgcacttcgaggacatcagcaagctgctcaccgtgctgtcc
ggcctggtcgacaagggcaacacggtcatcgtcatcgagcacaacctcgatgtcatcaag
accgccgactgggtcgtcgacatgggccccgagggcggtggcggcggtggcctcgtcatc
gcggagggcacacccgaggaggtcgccggggttccggccagccacacgggcaagttcctg
cgggaggtcctgggcgccgagcgcgtcagcgacgcctcggaggtgaaggccccgcgcaag
acggccgccaagaaggcggtggccgccaggtcgacgacgaagaagacggcgacggccaag
accaccacagcaagggccacgaccaaggccaccaccgaaaaggccgccaacaacacggcc
accaagaaggcggccgcggtcacgaagaaggcgaccccggcgaagaagacgacgagggcc
cgcaaggcctga
DBGET
integrated database retrieval system