Streptomyces liliifuscus: JEQ17_35480
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Entry
JEQ17_35480 CDS
T08169
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
slf
Streptomyces liliifuscus
Pathway
slf00040
Pentose and glucuronate interconversions
slf01100
Metabolic pathways
slf02020
Two-component system
slf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
JEQ17_35480
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JEQ17_35480
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JEQ17_35480
Enzymes [BR:
slf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
JEQ17_35480
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
JEQ17_35480
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QQM44187
UniProt:
A0A7T7REZ7
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All DBs
Position
8231110..8232171
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AA seq
353 aa
AA seq
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MTHFRSSKRLPGPGPGLGPGRVLITVTALVAALGLGAVAPAEAVSESVGRTDKAHGFASL
EGGTTGGAGGKVVTVTTQAGLERYAAAEEPYVIRVAGTIKAEPFGANVVVASDKTIIGVG
TAGELVQGELHLTPGTHNVIIRNLTIRDSYVEGNWDCKDTDFDGIQMDTVHHVWVDHNRF
SRICDGQLDIRKDSEYVTVSYNRFENNNKTFGIGWTPNVKTQITIDHNWFRGTKQRNPSA
DNCAYAHLYNNYMTAQADPGDPVWTYGNWARGKTRMVIENSYYQDVQHPYQADATAELVQ
RGSILKNTGGRQETWGAAFDPRDFYDHRLDPAAAVPALVSRLSGPQKALPARQ
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacttccgtagcagcaagcgcttgcccggaccggggccagggcttggccccggc
cgggtcctgatcacggtcaccgccctggtggccgcactggggctcggggccgtcgccccg
gccgaggcggtctccgagagcgtcggccggaccgacaaggcccacggtttcgcgtccctg
gagggcggtacgacgggaggcgccggcggcaaggtcgtcaccgtgaccacccaggccggc
ctggagcgctacgcggcagccgaggagccgtacgtcatccgggtcgccgggacgatcaag
gccgagccgttcggcgcgaacgtcgtcgtggcctcggacaagaccatcatcggcgtcggc
acggccggggagctcgtccagggcgagctgcacctcacgcccggcacgcacaacgtgatc
atccgcaacctgacgatccgcgactcgtacgtcgagggcaactgggactgcaaggacacc
gacttcgacggcatccagatggacaccgtccaccacgtctgggtcgaccacaaccgcttc
tcgcggatctgcgacgggcagctcgacatccgcaaggacagcgagtacgtcaccgtctcc
tacaaccgcttcgagaacaacaacaagaccttcggcatcggctggacgccgaacgtgaag
acgcagatcaccatcgaccacaactggttccgcggcacgaagcagcgcaacccctcggcc
gacaactgcgcctacgcacacctctacaacaactacatgaccgcccaggcggaccccggc
gaccccgtatggacgtacggcaactgggcgcgcggcaagaccaggatggtcatcgagaac
agctactaccaggacgtccagcacccctaccaggccgacgccacggccgagttggtgcag
cgcggctcgatcctgaagaacaccggcgggcgccaggagacgtggggcgcggccttcgac
ccgcgggacttctacgaccaccggctcgacccggcggcggccgttcccgcgctggtgtcc
aggctctccggtccgcagaaggcactgcccgcccgccaatga
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