Streptomyces liliifuscus: JEQ17_35495
Help
Entry
JEQ17_35495 CDS
T08169
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
slf
Streptomyces liliifuscus
Pathway
slf00040
Pentose and glucuronate interconversions
slf01100
Metabolic pathways
slf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
JEQ17_35495
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JEQ17_35495
Enzymes [BR:
slf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
JEQ17_35495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Sam68-YY
Motif
Other DBs
NCBI-ProteinID:
QQM44190
UniProt:
A0A7T7REZ9
LinkDB
All DBs
Position
8234796..8236127
Genome browser
AA seq
443 aa
AA seq
DB search
MRTRIWHAHVITSLAGCTALVLGVTGTVAHAQAVPVTQAAQGRDLGRETLAVGDGWGSEG
AGTTGGAGATAEHVYTVADWAEFKAALKAGGDAPKIIKVKGMIDAVSEGCEAFVAGGYDL
QQYLKDYDPAVWGNDEVASGPQEDARVASAANQDSEIKANIPSNTTIVGVGKNSGILGGS
LQIKGVSNVIMRNLTVEAPLDCFPKWDPTDDNRTGNWNSEYDAVVVYGTDHVWIDHNTFT
DGRYPDSERPVHFGKVFQQHDGLTDIVRGANHVTVSWNRFQDHDKNMLIGNSDSTATTDA
GKLKVTMHHNRFDGILQRSPRVRFGQVDVYNNHYVVTENQKSDYYIFGVGISSQLYASDN
AISLPAGAAVGKVLKKWNEAPLTAENNHVNGKLTDLIAVHNAEIPEETLQSGAGWKPTLR
TKVDSPRAVPGIVNSRAGAGKVC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactcgtatatggcatgcccatgtcattacatcccttgctggatgcaccgctctc
gttctcggtgtcaccgggaccgtcgcccatgcccaggccgtcccggtcacccaggccgcc
caagggcgtgacctcgggcgggagacccttgccgtcggtgacggctgggggtccgagggg
gccggtaccaccggtggggccggtgccaccgccgagcacgtctacaccgttgccgactgg
gccgagttcaaggccgcgttgaaggccggtggggacgcgccgaagatcatcaaggtcaag
ggcatgatcgacgccgtctccgaggggtgcgaggccttcgtcgccgggggctacgacctc
cagcagtacctcaaggactacgacccggcggtctggggcaacgacgaggtcgccagtggt
ccgcaggaggacgcgcgggtcgcgtccgccgccaaccaggactcggagatcaaggccaac
atccccagcaacaccaccatcgtcggagtcggcaagaactccggcatcctcggcggcagc
ctccagatcaagggcgtctcgaacgtcatcatgcgcaacctcaccgttgaggccccgctc
gactgcttcccgaagtgggacccgaccgacgacaacaggaccggcaactggaactccgag
tacgacgccgtggtcgtctacggcaccgatcacgtgtggatcgaccacaacacgttcacc
gacgggcgctaccccgacagcgagcggccggtccacttcggcaaggtcttccagcagcac
gacgggctgacggacatcgtgcgcggagccaaccacgtgacggtgtcctggaaccgcttc
caggaccacgacaagaacatgctgatcgggaacagcgacagcaccgccaccacggacgcc
ggcaagctcaaggtcaccatgcaccacaaccgcttcgacgggatccttcagcgctctccg
cgtgtgcggttcggacaggtcgacgtctacaacaaccactacgtcgtgacggagaaccag
aagtccgactactacatcttcggcgtcggcatctcctcgcagctctacgccagtgacaac
gcgatctcgctgccggccggagccgccgtcggcaaggtcctgaagaagtggaacgaggcg
cccctcaccgccgagaacaaccacgtcaacggcaagctgacggacctcatcgccgtccac
aacgcggagattcccgaggagaccctccagtccggcgccggctggaagcccactctccgt
acgaaggtcgactcgccgcgggccgtgccgggcatcgtcaacagccgcgccggtgccgga
aaggtctgctga
DBGET
integrated database retrieval system
