Streptomyces liliifuscus: JEQ17_41940
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Entry
JEQ17_41940 CDS
T08169
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
slf
Streptomyces liliifuscus
Pathway
slf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JEQ17_41940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slf03400
]
JEQ17_41940
Enzymes [BR:
slf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JEQ17_41940
DNA repair and recombination proteins [BR:
slf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JEQ17_41940
Prokaryotic type
JEQ17_41940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QQM45330
UniProt:
A0A7T7RG34
LinkDB
All DBs
Position
complement(9623062..9623739)
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AA seq
225 aa
AA seq
DB search
MAPRPLNEIVEQGWAKALEPVAGRIAEMGDFLRAEIAAGRTYLPAGPNVLRAFQQPFDDV
RVLIVGQDPYPTPGHAVGLSFSVAPEVRPLPGSLINIYRELTTDLGLPPPTNGDLTPWTQ
QGVLLLNKALTTAPRKPAAHRGKGWEEVTEQAIRALAARGRPLVSILWGRDARNLRPLLG
DLPSVESSHPSPMSADRGFFGSRPFSRANDLLTRQGGTPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggcaccacgaccgttgaatgaaatcgtcgaacagggctgggcgaaagcgcttgaaccc
gtggccgggcggatcgccgagatgggggacttcctgcgcgcggagatcgccgcgggacgc
acctatctgccagcgggcccgaacgtgctccgcgccttccagcaacccttcgacgacgtc
cgggtcctcatcgtcggccaggacccctatccgaccccggggcacgcggtggggctgtcg
ttctcggtcgcgcccgaggtgcgtccgctgcccggcagcctcatcaacatctaccgggag
ctgaccaccgacctgggtctgcccccgccgacgaacggcgatctgacgccctggacccag
cagggcgtcctgctgctcaacaaggcgctgaccacggccccgcgcaagccggccgcccat
cgaggcaagggctgggaagaggtcacggagcaggcgatacgggcgctggccgcgcggggg
cgtccgctggtgtcgatcctgtgggggcgcgacgcccgcaatctccggccgctgctgggc
gatctgccgtcggtggagtcgtcgcatccgtcaccgatgtcggcggaccgcggcttcttc
ggttcgcgtccgttcagccgggccaacgacctgctgacccgccaggggggcacccccgtg
gactggcggctgccgtga
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