Streptomyces liliifuscus: JEQ17_45525
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Entry
JEQ17_45525 CDS
T08169
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
slf
Streptomyces liliifuscus
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slf03021
]
JEQ17_45525
Transcription machinery [BR:
slf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JEQ17_45525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
MarR_2
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QQM45969
UniProt:
A0A7T7L3V4
LinkDB
All DBs
Position
complement(10439447..10440325)
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AA seq
292 aa
AA seq
DB search
MTAVTAGEATATAQRTQAVDETALPLIDEPSLIKPKDARDLSRQFFDRLAVLEEGTREYQ
YARNTLIEMNLSLVRYAASRFRGRGDSMEDIVQVGTIGLIKAIDRFELTREVEFTSFAVP
YIVGEIKRFFRDTSWAVHVPRRLQEARVELAKATEELRTRLGRTPTTAELSQLMSLPEEE
VIEARKAANCYNSSSLDAALTSDGDSQGETVLADFIGEDDRALELVDDLHSLTPLIAELD
ERERLIIHLRFVEERTQAEIGEVIGISQMHVSRLISRIIKRLRAGLLDPSVA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgtgacggcaggcgaagcaacggccacggcacagcggacgcaggcggtcgac
gagacggcactccctctcatcgacgaaccgtcgctgatcaagccgaaggacgcccgcgat
ctgtcccgacagttcttcgaccgcctggccgtgctggaggaaggcacccgcgaataccag
tacgcgcgcaacaccctgatcgagatgaacctgtccctcgtccggtacgcggcctcccgg
ttccgcggccggggcgactcgatggaggacatcgtccaggtcggcaccatagggctgatc
aaggcgatcgaccggttcgagctgacccgcgaggtggagttcacgtccttcgccgtcccc
tacatcgtcggcgagatcaagcggttcttccgcgacacgagctgggccgtccatgtgccg
cgtcgtctgcaggaggcccgggtcgagctggcgaaggccacggaggaactgcggacgcgt
ctcggccgtacgcccacgaccgccgagctctcgcagctgatgtcgctgcccgaggaagag
gtcatcgaggcccgcaaggccgcgaactgctacaactcctcatcgctcgacgcggccctc
acctccgacggcgactcgcagggcgagaccgtcctggccgacttcatcggcgaggacgac
cgggcgctggagctcgtggacgacctccactccctgacccccctcatcgccgaactcgac
gagcgcgagcgcctcatcatccatctgcggttcgtcgaggagcggacccaggcggagatc
ggcgaggtcatcggcatctcccagatgcatgtctcgcgactgatcagccgcatcatcaag
cggctgcgcgccggtctgctcgatccctccgtggcctga
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