Staphylococcus lugdunensis HKU09-01: SLGD_01030
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Entry
SLGD_01030 CDS
T01177
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
slg
Staphylococcus lugdunensis HKU09-01
Brite
KEGG Orthology (KO) [BR:
slg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slg03009
]
SLGD_01030
Enzymes [BR:
slg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SLGD_01030
Ribosome biogenesis [BR:
slg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SLGD_01030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_15
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
TRAM
PrmA
Methyltransf_11
N6_N4_Mtase
Methyltransf_12
LOR
PDGF
Motif
Other DBs
NCBI-ProteinID:
ADC87162
LinkDB
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Position
1093741..1095126
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AA seq
461 aa
AA seq
DB search
MWGEDVEEINKNDIRIGNVIDLTHEGHGVVKIDRYPIFIPNVLINEEIKYKVIKVKKNFA
IGKLLEVNKASHHRVDPPCVYYWKCGGCQLQHMSYEAQLAMKKEQVVNLFHRKGQFTDTV
INDTIGMDNPWRYRNKSQVPIGQDKMNHKIMGYYRQRSHDIIDMDSCLIQDKQHQDIMNH
VKKWINEYHISIYNERTKKGVLRHLVIRTGHYTDEIMVIFVTNGSKFKHANMLVEQLKQA
FPNITSIKQNINNSHSNVIMGQQSATLYGKDKIVDQLSDITFKISDQSFYQINSSQTEKL
YQKAIDYAQLDGQEIVLDTYCGIGTIGLYMAPVAKHVYGVEVVPSAIKDARQNALVNDLH
NTTFVCGKAEDVIMDWQREGIQPDVVMVDPPRKGCEAQFIQTLLDLNPERIVYISCNPST
QQRDAHMLATQYDLKEITPVDMFPQTTHIETVALFKKKQHK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtggggtgaagatgtggaagaaataaacaaaaatgacattagaatcggtaacgtcatt
gatttaacacacgaagggcatggcgtagtgaaaattgatcgttatccaatatttattcct
aatgtcttaataaatgaagaaattaagtataaagttattaaagtaaagaagaattttgca
ataggtaaattacttgaggtaaataaagcgagtcatcatagagttgaccctccttgtgtt
tattattggaaatgtggagggtgtcaattacagcatatgagttatgaagcgcaacttgca
atgaagaaagaacaagttgttaatctttttcatagaaaagggcaatttactgatacagta
atcaatgacactattggaatggataatccttggcgctatcgaaataagtcgcaagtacca
attggtcaagataaaatgaaccataaaattatgggctattaccgtcaaagaagccatgat
attatcgatatggatagttgccttatccaagataagcaacaccaagatattatgaatcat
gttaaaaaatggataaatgaatatcatatcagtatttataacgagcggactaagaaaggc
gttttacgacacttggtgatacgcactgggcattatacagatgaaatcatggtaatcttt
gtaacgaatggttctaaatttaaacacgccaatatgctggtggaacagttaaaacaagct
tttccgaacattacgagtatcaaacaaaatattaacaatagtcattccaatgtaattatg
ggtcagcagtcggcgactttatatgggaaagacaagatcgttgatcaattaagtgatatt
acgtttaaaattagtgatcaatcattttatcaaattaattctagccaaactgaaaagcta
tatcaaaaggctattgattatgcgcaattagatgggcaagaaattgtacttgatacgtat
tgtggtataggtacaattggcttatatatggcacctgtagccaaacatgtctatggagtt
gaagtagtaccctctgcaattaaagatgcgcgccaaaatgcactagttaatgatttacac
aacactacatttgtgtgtggtaaagcggaagacgtcattatggattggcaacgtgagggt
atccaaccagatgttgtaatggtagatccgcctagaaaagggtgtgaggcgcaatttatt
caaacattgcttgatttaaatcctgaacgaattgtttatatttcatgcaatccatccaca
caacagcgtgacgcacatatgttagctacgcaatatgatttaaaagaaattacacccgta
gacatgtttccacaaaccacacatattgagacggttgctttatttaaaaagaaacagcat
aaatag
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