Staphylococcus lugdunensis HKU09-01: SLGD_01227
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Entry
SLGD_01227 CDS
T01177
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
slg
Staphylococcus lugdunensis HKU09-01
Pathway
slg03030
DNA replication
slg03430
Mismatch repair
slg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLGD_01227
03430 Mismatch repair
SLGD_01227
03440 Homologous recombination
SLGD_01227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slg03032
]
SLGD_01227
03400 DNA repair and recombination proteins [BR:
slg03400
]
SLGD_01227
Enzymes [BR:
slg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLGD_01227
DNA replication proteins [BR:
slg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SLGD_01227
DNA repair and recombination proteins [BR:
slg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SLGD_01227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ADC87318
LinkDB
All DBs
Position
1260369..1263563
Genome browser
AA seq
1064 aa
AA seq
DB search
MVVHLNIHTSYDLLNSSLKIEDVVAKASKQGYTALAITDTNVLYGYPKFYDACVSANIKP
IFGMTVYITDGLSSVEAVLYALNNEGLTAMYQLSSAIKMKDKSLVPFEWITKYQSNIAIV
FKQVEQKHGHILEKFLNDEFIYVNSDSKNDFGLPRVWLRTARYLNDNDADTIAALQAIKL
NEKLDLVNEMDNLNEHFLEASELDELTVSQEEWAQTQALAEKCNAEIQYHQSLLPQFKTP
DNSSSKAYLWKQLVQRLKTLQLNQKNYIDRLNHEFKIITNMGFEDYFLIVSDLIHYAKTH
DVMVGPGRGSSAGSLVSYLLGITTIDPIKYNLLFERFLNPERVTMPDIDIDFEDTRRERV
IEYVQQKYGEYHVSGIVTFGHLLARAVARDVGRIMGFDEITLAEISKLIPHQLGITLNQA
YDNDKFKDFVHRNYRHEKWFELCKKLEGLPRHTSTHAAGIIINDQPLFNFVPLTIGDTGL
LTQWTMTEAERLGLLKIDFLGLRNLSIIHQIVTQVKYDLNVEIDIEAIPFDDPKVFALLS
QGETTGIFQLESEGVRHVLQRLKPQHFEDIVAVTSLYRPGPMEEIPTYITRRHEPSKVAY
LHPDLEPILKSTYGVIIYQEQIMQIASRFAGFSYGEADILRRAMSKKNRAVLENERQHFV
EGAQRNGYEEQISKQIFDLILKFADYGFPRAHAVSYSKIAYIMSYLKVHYPHYFYANILS
NVVGNEQKTAAIIEEAKIQGIAILPPHINHSHWFYKATPQGIYLSLGAIKGVGYQSVKTI
VNNRKEQGNFKSFKDFSKRIPKRIKTRKLLESLILVGAFDSLGHNRATSLQMIDEAVDDI
THVGLDIFDIAGMTPKDEIEEREELNDLQLSTYEKEYLGFYISQHPVEKMFHRKQFLGIY
TLANAANHQPILVQFDQIKQIRTKKGQQMAFVVVNDGIKVIDGVIFPEQYRQYGNQIQEN
EMYIVSGKFEQRNQKQQLVIQQITYLEDYQQHKISHAKQIVLRHINDKQRLKQQLQTEKS
FKSIDVNYFDETTKQMQNVGYIEREQGKIEQLIDNYKPEDIRII
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
ttggttgtacatcttaatattcatacgtcatatgatttgttgaattcaagtttaaaaatt
gaagatgttgtggctaaagcttcaaagcaaggttatacagcattagctattactgatacc
aatgtgttatatggctatccaaaattttatgacgcgtgtgtgtctgccaatattaaacct
atctttgggatgactgtctatattactgatggattatcttctgtagaagctgtactttat
gcgttaaataatgaaggattaacagcgatgtaccagttatcttcagctatcaaaatgaaa
gataaatcattggtgccatttgaatggattactaaataccaaagcaacattgctattgtt
tttaaacaagtagaacaaaagcacggacatatattagaaaaatttttaaatgatgagttt
atatatgtaaatagtgatagcaaaaatgattttggattgccacgagtctggttacgaact
gcacgttatttaaatgataatgatgcagataccattgccgcccttcaggctattaaattg
aatgaaaagttagatttagttaatgagatggataatttaaatgaacatttcctcgaagct
agtgagctagacgaattgacagtttcacaagaggagtgggcacaaacgcaagcattagct
gaaaagtgtaatgcagaaatacaatatcatcaatcattgttgccacaatttaaaacacca
gataatagtagttctaaagcatacctatggaaacagcttgtgcagcgtttaaaaacatta
caattaaatcaaaaaaattatatagacagactaaaccatgaatttaaaatcattacaaat
atgggatttgaagactattttctgattgttagtgacttaattcattatgccaaaacccat
gatgtaatggtaggaccgggccgtggatcttctgcaggatcattagttagctatttattg
ggaataacaacgattgatcctataaaatataatttgctgtttgagcgatttttaaatcct
gaacgtgttacgatgccagatattgatattgattttgaagacacgagacgtgagcgcgtc
attgagtatgtgcaacaaaaatatggcgaatatcatgtgtcaggaattgttacctttgga
catctattggcaagggctgttgcaagagatgtaggtcgaattatgggatttgatgaaatt
acacttgctgaaatatcaaaacttattcctcatcaattaggtattacgttaaaccaagcc
tatgacaatgataaattcaaagactttgttcatcgcaattatcgacatgaaaaatggttt
gaactatgtaagaaattagaaggattaccgcgtcatacatctacacatgctgcaggaatt
attattaacgaccaacctttatttaatttcgttcctttaacaataggtgatacaggatta
ttgactcaatggacaatgacagaagcagaacgtttaggattattaaaaattgacttttta
ggattgcgtaatctatctattatccatcaaatagtgacacaagttaaatatgatttaaat
gttgagatcgatattgaagcaatacctttcgatgatcctaaagtatttgcactgttatca
caaggtgaaacaacaggtattttccaactagaatcagaaggcgtccgtcacgtgttacag
cgcttgaaaccgcaacactttgaagatattgttgcagtaacttctttatatcgtccgggt
ccaatggaagaaatacccacatatattacacgacgtcacgaaccatcaaaggtagcatac
ttacatccagatttagagcccattttaaaaagtacatatggtgttatcatttatcaagag
cagattatgcaaattgctagtcgatttgctggcttcagttatggagaagcggatatatta
agacgtgcaatgagcaagaaaaatcgtgctgtattagaaaatgaacgacaacattttgtt
gaaggcgcccaaagaaatggctatgaagaacaaataagtaaacaaatctttgatttaatt
ttaaaatttgctgattatggtttccctagagcgcatgcagttagttattctaaaatagct
tatatcatgtcgtatttaaaagtacactatccacattacttttacgctaatattttaagt
aatgttgtaggaaatgagcaaaaaacagcggcaattattgaagaagcaaagatacaggga
attgcaattttaccaccacatattaatcatagtcattggttttataaagcaacaccacaa
ggtatttacctatctttaggtgcaattaaaggtgtaggctatcaaagcgtgaaaacaatc
gtaaataatagaaaagaacaaggaaattttaaaagttttaaagatttttctaaacgcata
cccaaacgtataaaaacacgtaaacttttagagtctttaattttagtaggggcatttgat
tcgctggggcacaatcgcgcaacatcacttcaaatgatagatgaagcagtcgatgatatt
acacatgttggtttagatatttttgacattgcgggtatgacccctaaagatgagattgag
gaacgagaagaattgaatgatttacagttaagcacgtatgaaaaagaatatcttgggttt
tatatttcacaacatccagttgaaaaaatgtttcatcgcaaacagttcttaggaatttat
acattggctaatgctgctaatcatcaacctattcttgtgcagttcgatcaaatcaaacag
ataaggacgaagaaaggccaacaaatggcttttgttgttgtaaatgatggtattaaagtt
attgatggtgtgatttttccagagcaataccgtcaatatggtaatcagatacaagaaaat
gaaatgtatattgtcagtgggaagtttgaacaacgtaatcagaagcagcaattagttatt
cagcaaattacttacttagaagactatcagcagcacaagattagccatgcgaagcaaatt
gtattgcgccatatcaatgataaacaacgattaaaacaacagttacaaactgagaaatct
tttaaaagtattgatgtgaactattttgatgaaactacgaaacaaatgcaaaatgttggc
tacattgagcgtgaacaaggtaaaatcgaacagcttatagataactataagccagaagac
ataagaattatataa
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