Staphylococcus lugdunensis HKU09-01: SLGD_01552
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Entry
SLGD_01552 CDS
T01177
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
slg
Staphylococcus lugdunensis HKU09-01
Brite
KEGG Orthology (KO) [BR:
slg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slg03400
]
SLGD_01552
DNA repair and recombination proteins [BR:
slg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SLGD_01552
Archaeal homologous recombinant proteins
SLGD_01552
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
zf-C2H2_2
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
ADC87643
LinkDB
All DBs
Position
complement(1599295..1602321)
Genome browser
AA seq
1008 aa
AA seq
DB search
MKPLTLTLSNFGPFLNETIDFKQVFENQLFLISGKTGSGKTMIFDGIVYALFGVASTKSR
TESDLRSHFAEAKEPMSVTFEFEINQRQFKIFRQGSYIKEGNKTKTPGKLTFYEFDGEVF
DLRESKIHEGNLFIQQLLGVNAEQFRQLFILPQGEFKRFLVSSSSDKQSILRTLFNSLRF
EQIQDILADEVKNEKQLIEQRYNKIAMVWEEIEDFEIEDLQALKQIESIQIQKLVDAIPI
FQKYGSEQLLATTKLKQAEKCQTEKLHKALVANNELEKQLNDLADYTQRFELLRQEQENI
DKLKHKITQLNEIRTLNTLVQQRESQIAKLNDFNNAITSKGKDIESIQEQQKQLQEQMQI
LIKSEHAINQYKEYIDKCHIIYQKIESHRKAMAENDNVKKQLSETQQKIKQYNEKQTKLK
KQKAENDIDYNKIVELTDELAHINKLIDKTKETLSNNQKFKELKNEYIEDKKQLKMIEKE
FEHVSNHINKLTAKNLDLNDKESFINELQSALSIGEICPVCGNEIQSLEKHIDFENIKLQ
KHQLDTLEKEKLSLTEQKIKLETEMSHAQDKMKEIKVDEEPLDLESLQVQYNEKELEKAS
FKEKYAMTKQIETQINEYKKDIHQMELQYKDLSHQRNQNEQLIGEFISTTQTKDIDSFIQ
QFESYKKQIEIFENSKEQLTNEIITANQQKQLESNNLINIQNQKHIAENEYQSVDKDIQT
EMRRYAIKDEKALFKILEDMHLKSDYEQQVEAYSKKYAALEHEIGRLKSLTHDKVLQDTK
QLENSYQVQSEKLDKVIEQENTLKYQLKKNDQKFDVLYENINYLTKELKSQQEIFNLAEI
LSGKNSQKLTLETYVLIYYLERIIAQANLRLATMSGQRYHLQRRKSLSHGYSGLEIDVFD
FHSNKSRHISSLSGGETFQASLALALGLSEVVQEESGGITLESMFIDEGFGTLDQETLDT
ALDTLVNLKSSGRMVGIISHVTELKQRIPLILEVTSKQFQSATQFKFN
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctttgactttaacgttgtctaactttggaccatttttaaatgaaacgattgat
ttcaaacaagtattcgaaaatcaattatttcttattagcggtaaaacaggttccggtaaa
accatgatttttgatggaattgtttacgctttatttggtgtagcatctacgaagagtaga
actgaaagcgatttgcgaagtcattttgctgaggctaaggaacctatgagcgtaacgttt
gaatttgaaattaatcagcgacagttcaaaatttttagacaaggttcatatataaaagaa
ggcaataaaactaaaacgcctggaaagttaactttctatgaatttgatggagaagtgttt
gatttgcgtgaaagtaaaatacatgaaggcaatttatttatacaacaactcttaggcgtt
aatgcagaacaatttagacagttgtttattttgcctcaaggagaatttaaacgattttta
gtttcaagtagttcagacaagcaaagcattctacgtacattattcaatagcctccgtttt
gagcaaatacaggatatattagctgacgaggtgaaaaatgagaaacaattgatcgaacaa
agatataacaaaatagcaatggtatgggaagaaattgaagattttgaaattgaagatttg
caagcactgaaacaaatagaaagtatacaaatacaaaagcttgtagatgctatacctatt
tttcaaaaatatggtagtgaacaattgttagcaacaacaaaattaaaacaagcagaaaaa
tgtcaaacagaaaagcttcataaagcattagtggcaaataatgaattagaaaagcaatta
aatgatttagctgattatactcaacgctttgaattattgcggcaagagcaagaaaatata
gataaacttaagcataaaattactcaattgaatgaaattcgaactttaaatacacttgtt
caacagcgagaatcacaaatagcaaaattaaacgattttaacaatgctatcacatcaaaa
ggtaaagatattgagtccatacaagagcaacaaaagcagctacaagaacaaatgcaaata
ctaataaaaagtgaacatgctattaatcaatacaaagaatatattgataagtgtcacata
atttatcaaaagatagaaagccacagaaaagctatggcagaaaatgataatgtaaaaaaa
caattaagtgaaacgcagcagaagataaagcaatataatgagaaacaaactaagcttaaa
aagcaaaaagcagaaaatgatatagattataataaaattgttgaattaacagatgaattg
gcacatatcaacaaattaatagataagactaaagaaactttaagcaataaccaaaagttt
aaggaattaaaaaatgaatatattgaagataagaaacagttaaaaatgattgaaaaagaa
tttgagcatgtttcaaatcatataaataagttgactgcaaagaatttagacttaaatgac
aaagaaagttttattaacgagcttcaatcagcattatctattggagaaatttgtcctgta
tgtggtaatgagattcaatctttagaaaaacatattgactttgaaaatattaaactacaa
aaacatcaattagatacacttgaaaaagaaaagttgtcacttacagagcaaaaaattaaa
cttgaaaccgaaatgtcacacgctcaagataaaatgaaagaaataaaggttgatgaagaa
ccacttgatcttgagtcgttgcaagtacaatataatgaaaaagaactagaaaaagcttct
tttaaagaaaaatatgcgatgactaaacaaattgaaacacaaataaatgagtataaaaaa
gatatacatcagatggaactacaatataaggatttatctcatcagaggaaccaaaatgaa
caacttataggagaatttatatcaacaacccagactaaagatatcgattcatttatacaa
cagtttgaaagctataaaaaacaaatagaaatatttgaaaattcgaaagaacaattaaca
aatgaaattattacagccaatcagcaaaagcaattagaaagtaataatttaatcaatata
cagaaccaaaaacacattgcagaaaatgagtatcaaagtgttgataaagatatacaaact
gaaatgagacgatatgcgattaaggatgaaaaagcgttatttaaaatattagaagacatg
catcttaaatcagattatgaacaacaagtcgaagcatatagcaagaaatacgcagcactt
gagcatgaaatagggcgtttaaaatcattgactcatgataaagttctacaagacacaaaa
caattagaaaattcatatcaagttcaaagtgaaaaattagataaagttatagaacaagaa
aatacattgaaatatcaattgaaaaagaacgatcaaaagtttgatgtactttatgaaaat
atcaattatctgactaaagaattaaaatcgcaacaagaaatttttaatttagcagaaatt
ctttcgggaaaaaatagtcagaagttaacgctggaaacttatgtattaatttattatttg
gaacgcattatcgcacaagcaaacttaagattagctacaatgagtggtcaacggtatcat
ctgcaaagaagaaaaagtttatcacacggttatagtggtttagaaatagatgtctttgat
tttcattctaataaatctagacatattagttcattatctggtggggaaacatttcaagct
tcgttagctttagcgcttggtttaagtgaagttgttcaagaagaatcaggtggaataaca
ctggaatctatgtttattgacgaaggatttggtactttagatcaagaaacacttgataca
gcattagatacacttgttaacttaaaatcatctggtcgtatggtaggaattatttcacat
gtaactgagcttaaacaacgtattccgctcatattagaagtaacttctaaacagtttcaa
agcgctacacaatttaagtttaattaa
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