Staphylococcus lugdunensis HKU09-01: SLGD_01623
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Entry
SLGD_01623 CDS
T01177
Name
(GenBank) tRNA pseudouridine synthase B, Psi55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slg
Staphylococcus lugdunensis HKU09-01
Brite
KEGG Orthology (KO) [BR:
slg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slg03016
]
SLGD_01623
Enzymes [BR:
slg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SLGD_01623
Transfer RNA biogenesis [BR:
slg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SLGD_01623
Prokaryotic type
SLGD_01623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADC87714
LinkDB
All DBs
Position
complement(1675529..1676446)
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AA seq
305 aa
AA seq
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MYNGILPVRKERGLTSHDVVFKLRKILQTRKIGHTGTLDPEVDGVLPVCIGIATRVSDYI
MDMGKTYHATVAIGTSTTTEDQTGDILEQKTINVGEITSEAIDSTLSQFQGWITQIPPMY
SSVKVKGKKLYEYARNGETVERPERKVEIKSIQRVSEIHFKQGMCLFDIDITCGKGTYIR
TLATDIGKALGFPAHMSRLTRTSSGGFNISDSLTIEQIKVLHEQEQLQEKLFPIEYGLKG
LPSIEIYNEDIKHRILNGQKFQKSMFSTVIQQQIVFIDGRTQQVLAIYISHPDKPKEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataacggtattttgcctgtacgcaaggaaagaggacttacaagtcatgatgtcgtc
tttaaattgagaaagatattacaaactaggaaaataggccacacgggcacacttgatcct
gaagttgatggtgtattgccagtttgcattggcatcgccactcgagtaagtgattatatc
atggatatgggaaaaacctatcatgctactgtggctatagggacaagtaccactactgaa
gatcaaactggagatatattagaacagaaaacaataaatgtaggagaaattacatcagaa
gcaattgactcgaccttgtctcaatttcaaggatggattacacaaattccacctatgtat
tcatcagttaaagttaaaggaaaaaagctttatgaatatgctagaaatggtgaaactgta
gagcgtccagaaagaaaagttgagataaaaagcatacaacgtgtttcagaaattcacttt
aaacaaggcatgtgcttatttgatatagatattacttgtggtaaagggacatatatacgt
acgcttgctacagatattggcaaagcattaggctttccagcacatatgtcacgccttact
cgaacatcatctggcggatttaatataagtgatagtttaactattgagcaaatcaaagta
ttgcatgagcaagaacagttacaagaaaagttgtttcctatagaatatggattaaaaggt
ctaccttctattgaaatatataatgaggacatcaagcatcgtatacttaatggacaaaag
tttcagaagtctatgttttctacagttattcaacaacaaattgtatttattgatggtagg
acacaacaagttttagctatctatatttcacatccagataagccaaaggaaattaaacca
aagaaagtttttaattaa
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