| Entry |
|
|---|
| Name |
(GenBank) DNA-directed RNA polymerase beta subunit
|
|---|
| KO |
|
|---|
| Organism |
slg Staphylococcus lugdunensis HKU09-01
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:slg00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SLGD_02347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:slg03021]
SLGD_02347
03400 DNA repair and recombination proteins [BR:slg03400]
SLGD_02347
Enzymes [BR:slg01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SLGD_02347
Transcription machinery [BR:slg03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SLGD_02347
DNA repair and recombination proteins [BR:slg03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SLGD_02347
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
complement(2415845..2419399)
|
|---|
| AA seq |
1184 aa
MAGQVVQYGRHRKRRNYARISEVLELPNLIEIQTKSYDWFLKEGLLEMFRDISPIEDFTG
NLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLVIKETGEVKEQEVFMGDFPLMT
DTGTFVINGAERVIVSQLVRSPSVYFNEKIDKNGRENYDATIIPNRGAWLEYETDAKDVV
YVRIDRTRKLPLTVLLRALGFSTDQEIVELLGDNEYLRNTLEKDGTENTEQALLEIYERL
RPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKANKKLHLKHRLFNQKLAEPIVNSETG
EIVAEEGTVLDRRKLDEIMDVLETNANSEVFELEGTVIDEPVEIQSIKVYVPNDEEGRTT
TIIGNALPDSEVKCITPADIISSMSYFFNLLAGIGYTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTESITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELT
HKRRLSALGPGGLTRERAQMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFG
FIETPYRKVDIDTNAITDQIDYLTADEEDSYVVAQANSRLDENGRFLDDEVVCRFRGNNT
VMAKEKMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPEAPFVGTG
MEHVAARDSGAAITAKYRGRVEHVESNEILVRRLIEENGKEYEGELDRYPLAKFKRSNSG
TCYNQRPIVSIGDVVEYNEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVSESALKNLDDRGIVYVGAEVKDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDT
LSPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPL
GVPSRMNIGQVLELHLGMAAKNLGIHVASPVFDGANDEDVWSTIEEAGMARDGKTVLYDG
RTGEPFDNRISVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTYKSDDTVGRVKTYEAIVKGENISRPSVPESFRVLMKELQSLGL
DVKVMDEHDNEIEMADVEDEDTTERKVDLQQKDAPQSQQEETAD |
|---|
| NT seq |
3555 nt +upstreamnt +downstreamnt
ttggcaggtcaagttgtccaatatggaagacatcgtaaacgtagaaactacgcgagaatt
tcagaagtattagaattaccaaacttaatagaaattcaaactaaatcttatgattggttc
ctaaaagaaggtttactagaaatgttccgtgatatctcaccaattgaagatttcacaggt
aacctatcattagagtttgtagattacagattaggtgaaccaaagtatgatttagaagaa
tcgaaaaatcgtgacgctacttatgctgcacctcttcgtgttaaagtgcgtctcgttata
aaagaaacaggtgaagttaaagagcaagaagtatttatgggagacttcccattaatgaca
gatacaggtacgtttgttattaatggtgcagagcgtgttattgtatcgcaattagtacgt
tcaccatccgtttactttaatgaaaaaattgacaaaaacggacgagaaaattatgatgct
acaatcattcctaaccgtggtgcctggttagaatacgaaacagatgctaaagatgttgtc
tatgttcgtattgatagaactcgtaaattgccattaactgtcttattacgcgcattaggc
ttttcaactgatcaagaaattgttgagttgttaggagataacgaatacttgcgtaataca
ttagaaaaagacggaacagaaaacactgaacaagcgttattagaaatttatgaacgttta
cgtcctggtgaaccaccaacagttgaaaatgcaaaaagtttattatattctcgcttcttc
gatccgaaacgctatgatttagcaagcgttggacgttataaagcgaacaaaaaattgcat
ctaaaacaccgtttatttaatcaaaaattagcagagcctatcgtaaacagcgaaacaggt
gaaattgttgctgaagaaggtactgtattagatcgtcgcaaattagacgaaattatggac
gttcttgaaacaaatgcgaatagtgaagtattcgaattagaaggaacagtaatagacgaa
ccggttgaaattcaatcaatcaaagtctatgtaccaaatgatgaagaaggtcgtacaaca
acgataattggtaatgctttaccagattcagaagtgaaatgtatcacacctgcagatatt
atttcttctatgagttacttcttcaacttattagctggcattggttacacggatgatatc
gatcatttaggtaaccgtcgtttacgttcagttggtgagttattgcaaaaccaattccgt
attggtttatcaagaatggaacgtgttgtgcgtgaaagaatgtcaattcaagatacagaa
tctatcacaccacaacaattaattaatattagaccagttattgcatcaattaaagaattc
tttggtagttctcaattatcacaattcatggaccaagctaacccattagcagaattaaca
cacaaacgtcgtttatctgcgttaggacctggtggtttaacacgtgaacgtgcacaaatg
gaagttcgtgacgtgcattattctcactatggccgtatgtgtccgattgaaacaccagag
ggtccaaacattggtttgattaactcattatctagttatgcgcgtgtcaacgagtttggc
tttattgaaacgccttatcgtaaagtagatattgatacaaatgcaatcacagatcaaatt
gactacttaactgctgatgaagaagacagttatgtcgttgcacaagcgaactctcgcctt
gatgaaaatggtcgtttcttagatgatgaagtagtatgccgtttccgcggtaataatact
gttatggctaaagaaaaaatggactacatggatgtgtctcctaaacaagttgtttcagct
gcgacagcatgtattccattcttagagaacgatgactctaaccgtgcattgatgggtgca
aacatgcaacgtcaagcagttccgttgatgaaccctgaagcgccgttcgtaggaacaggt
atggagcatgttgctgctcgtgactctggtgctgcgattactgcaaaatacagaggtcgt
gtagaacacgttgaatctaatgaaatcctagtgcgtcgattaattgaagaaaatggaaaa
gaatatgaaggcgaacttgatcgctatccattagcgaagtttaaacgctctaactctggt
acatgttataaccaacgtccaattgtttctattggcgacgttgtagaatacaatgaaatt
ctagctgacggtccatcaatggagcttggtgaaatggcattaggccgcaacgttgtagtt
ggtttcatgacttgggacggctataactatgaagatgctgtcatcatgagtgaacgttta
gtcaaagatgacgtttacacatctattcatattgaagaatatgaatcagaagcacgtgat
acgaaattaggacctgaggaaatcacacgtgatattcctaacgtctctgaaagtgcactt
aaaaacttagacgatcgcggtattgtttatgtaggtgcagaagttaaagatggcgatatt
ttagtaggtaaagtaacgcctaaaggtgtcacagagctaacagctgaagaacgtctatta
catgcaatctttggtgaaaaagcacgtgaagtgcgtgacacttcattgcgtgtaccacat
ggtgctggcggtattgtgctagatgttaaagtcttcaaccgtgaagaaggagatgacaca
ctttctccaggtgttaaccaattagtacgcgtatatattgtgcagaaacgtaaaatacac
gttggggacaaaatgtgtggtcgtcatggtaacaaaggtgtcatttctaagattgttcca
gaagaggacatgccttatttaccagatggacgtccaattgatattatgttaaacccactt
ggtgtgccatcacgtatgaacattggacaagttctagagttgcatttaggtatggctgct
aaaaacttaggtattcatgttgcgtcaccagtatttgatggtgctaacgatgaagatgta
tggtcaacaattgaagaagctggtatggcacgtgacggtaaaaccgtattatatgatggc
cgtacaggtgagccattcgacaaccgtatctcagttggagttatgtacatgcttaaactt
gcacatatggttgatgacaaattacatgctcgttcaacaggtccatactcattagttaca
caacaaccacttggtggtaaagcacaatttggtggacaacgtttcggtgagatggaagta
tgggcacttgaagcttatggtgctgcctatacattgcaagaaatccttacttataaatct
gatgatacggtaggccgtgttaaaacatacgaagctatcgttaaaggtgaaaacatttct
agaccaagtgttcctgaatcattccgtgtattgatgaaagaacttcaaagtttaggttta
gatgtgaaagtgatggatgagcacgataacgaaatcgaaatggcagatgttgaagatgaa
gatacaacagagcgcaaagtagatttgcaacaaaaagatgcgccacaatctcaacaagaa
gaaactgctgattag |
|---|
