Staphylococcus lugdunensis HKU09-01: SLGD_02547
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Entry
SLGD_02547 CDS
T01177
Name
(GenBank) DNA polymerase III beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
slg
Staphylococcus lugdunensis HKU09-01
Pathway
slg03030
DNA replication
slg03430
Mismatch repair
slg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLGD_02547
03430 Mismatch repair
SLGD_02547
03440 Homologous recombination
SLGD_02547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slg03032
]
SLGD_02547
03400 DNA repair and recombination proteins [BR:
slg03400
]
SLGD_02547
Enzymes [BR:
slg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLGD_02547
DNA replication proteins [BR:
slg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SLGD_02547
DNA repair and recombination proteins [BR:
slg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SLGD_02547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Hint_2
Motif
Other DBs
NCBI-ProteinID:
ADC88611
LinkDB
All DBs
Position
2627084..2628217
Genome browser
AA seq
377 aa
AA seq
DB search
MMEFTIKRDYFITQLNDTLKAISPRTTLPILTGIKIDAKDNEVILTGSDSEISIEITIPK
QVDGEDIVTISETGSVVLPGRFFVDIIKKLPGNEVKLSTNEQFQTLITSGHSEFNLSGLD
PDQYPLLPQVSRDDAIQLSVKVLKNVIAQTNFAVSTSETRPVLTGVNWLIQDNELICTAT
DSHRLAVRKLQLEDNSENKNVIIPGKALAELNKIMSDSEEDIDIFFAQNQVLFKVGHINF
TSRLLEGHYPDTTRLFPENYEIKLGIDNGEFYHAIDRASLLAREGGNNVIKLSTGNDVVE
LSSTSPEIGTVKEEVNATNVEGGNLKISFNSKYMMDALKAIDNDEVEIEFFGTMKPFILK
PKADDSVTQLILPIRTY
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgatggaattcacaataaaacgagattactttattacacaactcaatgatacgttaaaa
gcaatctcacctagaacaacattaccgattttaactggtattaaaattgatgctaaagat
aatgaagtgattttgaccggttcagattcagagatatctattgaaattacaatacccaaa
caagtagatggtgaagatattgttaccatttctgaaactggttcagttgtacttcctggt
cgtttcttcgttgatatcattaaaaagttaccaggaaatgaagttaaactatctacaaac
gaacaatttcaaacacttattacatctggacattctgaattcaatcttagtggcttagat
ccagatcaatatccactattaccacaagtttcaagagacgatgcgattcaactatcggtt
aaagtactaaaaaatgtgatagcacaaacgaatttcgcagtgtccacctcagaaacacga
ccagtattaactggggttaactggcttatacaagataatgaattaatatgcacagcaacc
gattcacatcgtttggctgttagaaaattgcagttagaagataactcagaaaataaaaat
gtcatcattccaggaaaggctttagctgaattaaataaaattatgagtgatagtgaagaa
gatattgatatcttttttgcacaaaaccaagttttatttaaagttggccatatcaacttc
acatctcgtttgttagaaggacattatccagatacaacacgcttgttccctgaaaattat
gaaatcaaattaggcattgataatggtgagttttatcatgcgattgatcgtgcgtcatta
ttagcacgtgaaggtggaaataatgtcattaaattaagtacaggaaatgacgtcgttgaa
ttatcttcaacatctcctgaaattggtacagttaaagaagaagtaaatgcaaccaatgtt
gagggcggaaatttaaaaatttcatttaattctaaatacatgatggatgcgttaaaagcc
atcgataatgatgaagtagaaatagaattctttggaacaatgaaaccattcattttaaaa
cctaaagccgatgactcagtaacacagcttatcttgccaatccgcacatattaa
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