Sulfurovum lithotrophicum: YH65_00300
Help
Entry
YH65_00300 CDS
T03877
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
slh
Sulfurovum lithotrophicum
Pathway
slh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YH65_00300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slh03019
]
YH65_00300
03400 DNA repair and recombination proteins [BR:
slh03400
]
YH65_00300
Enzymes [BR:
slh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YH65_00300
Messenger RNA biogenesis [BR:
slh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
YH65_00300
DNA repair and recombination proteins [BR:
slh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
YH65_00300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Nudix_N
PE-PGRS_C
Motif
Other DBs
NCBI-ProteinID:
AKF24021
UniProt:
A0A7U4RPU5
LinkDB
All DBs
Position
56054..57832
Genome browser
AA seq
592 aa
AA seq
DB search
MNKLKTLEDYFGHKAFRPLQEEVVDAILNREDVLMILPTGGGKSLCYQLPTLLMEGVTVV
VSPLLALMHDQVVALRANGIPAAMLSSMQDMEESRQIEGQLHRGKIKLLYVAPERLTNAY
FLNMLHQLDINFFVIDEAHCVSEWGHEFRENYRRLSLLKEQFATTPIAAFTATATKAVEE
DIASNLGLQNPKRVRGSLFRENLTIHSRHRIKDGREQLLEFLKSHEGESGIIYTLSRKST
ESVAHFLQNKGIEARAYHAGLPTEEKHATYSDFVADRVQVVVATIAFGMGIDKSNIRFVV
HMTLPKTLENFYQEIGRAGRDGLEAETLLLFSAQDIVQQKMFIEDLPETPYKQHAFNKLD
SMVRFANSENCRHQSIAAYFDDRIEVCGTKCDNCTTTQSEKIDITTAARMLLSTILRTEQ
KFGLHYVIDVLRGSREQRVLQNGHDTLSVYGIGEEYSKAQWMTIGDKLLELGAVEIGEFK
VYRLTNFGVEVIKGAHSIELKKERLAVQKAKPKRKVTYFDDYDAEVYDRLRELRTQIASE
KGIPPYIVFSDKTLKDLSNKQPQTKGEMLEVHGIGEVKFERYGEAFLELLTV
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactgaaaacactcgaagactattttggacacaaggctttcaggccgctgcag
gaagaggtagtggatgctattttgaacagagaggatgtgctgatgatccttcccacggga
gggggaaaatcactctgctaccagcttcccacacttcttatggagggtgtgacggtcgtg
gtctctcctcttttggcgctgatgcatgaccaggtggtcgcgttgcgtgccaacggcatt
cccgctgccatgctctcaagtatgcaggacatggaagaaagccggcagatagagggacag
ctgcatcgtggaaagataaaactgctttatgtcgcgccggaacgtttgaccaatgcctat
ttcctcaatatgctgcatcagcttgacatcaacttttttgtcatcgacgaagcgcattgc
gtgagtgaatgggggcatgagttcagggagaattaccggcggctttcgctgctcaaagag
cagtttgctacgacacctattgctgcattcacagctacagcgaccaaggcggtggaagag
gatatagcatcaaatcttggtttgcagaaccccaagcgtgtcagaggttctctctttcgt
gaaaacctgaccatccactccagacaccgaatcaaagacgggcgtgaacagctgctggaa
ttcctgaagtcgcatgaaggggagtccgggatcatttataccctctcaagaaaatcgacc
gaatcggtggcccatttcctgcagaataagggtatagaggcaagggcgtaccatgccggt
ctacccacagaggaaaagcatgcgacctatagtgattttgtggctgacagggtgcaggtc
gtcgttgcgaccattgcattcggtatggggattgacaaaagcaacatccgtttcgtggtg
catatgacactgcctaaaacactggagaatttctaccaggagatcggacgtgcaggcagg
gacggtcttgaagcggaaaccctgctgctgttctccgcacaggatatcgtacagcagaag
atgttcatagaggaccttcccgaaacaccctacaagcagcatgctttcaacaaacttgac
agtatggtacgttttgccaattcggagaactgccgtcaccagagtatcgccgcctatttt
gacgatcgtatcgaagtctgcggaacgaaatgtgacaactgtacgacaacacagagtgaa
aagattgacattacgacggctgcacggatgctgctttcgactatcctgcgtaccgaacag
aagtttggactgcattatgtgatcgatgtgctcagaggaagcagggaacagcgagtgctt
cagaacgggcacgatactctttcggtctatggcataggagaggaatacagcaaggcacag
tggatgaccatcggagacaagcttctggagctcggtgcggtagaaataggtgagttcaag
gtttacagattgacgaactttggtgttgaggtcatcaagggtgcacacagcatcgagttg
aaaaaagaacgcctggcagtccaaaaggccaagccaaaacgcaaggtcacctattttgac
gactatgatgccgaagtgtatgacaggctcagagaactgcgtacacagatcgcatcggag
aagggtatacctccctacatcgtcttttcggacaaaacactcaaagaccttagcaataaa
caaccgcaaacgaaaggtgagatgctggaggtgcatggcataggagaagtgaagttcgag
aggtacggagaggcatttttggagttattgacagtgtag
DBGET
integrated database retrieval system
