Sulfurovum lithotrophicum: YH65_00535
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Entry
YH65_00535 CDS
T03877
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
slh
Sulfurovum lithotrophicum
Pathway
slh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YH65_00535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slh03400
]
YH65_00535
Enzymes [BR:
slh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
YH65_00535
DNA repair and recombination proteins [BR:
slh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YH65_00535
Prokaryotic type
YH65_00535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3855
Internalin_N
Motif
Other DBs
NCBI-ProteinID:
AKF24060
UniProt:
A0A7U4RPR8
LinkDB
All DBs
Position
108129..108830
Genome browser
AA seq
233 aa
AA seq
DB search
MPSNSWEKILQEAYGELEEAYRSFLEKDSGYIPNRENYLNAFKTLPREKVKYILFGQDPY
PRKESASGYAFIDAKVKEIFSDTGLSKEVNRATSLRNFIKMALVARGDLILEDLSQDAIS
AIDKTPLISSVKELRINFEKNGVLLLNTALIFTDKKSSTKHVKAWRPFVQSLLLSLEAQQ
PKLILFGTHAKELQKHLPLENFETIELEHPYNHTFISNPKALTLFGPMRLLDK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctaacagctgggagaagattcttcaggaggcgtatggagaacttgaggaggcg
tatcgctcttttcttgaaaaagacagcgggtatatcccgaacagagaaaactacctgaat
gccttcaagacactgcccagggagaaggtaaaatatatccttttcggtcaggatccctac
ccccggaaagagagtgccagcggctatgctttcatcgatgcaaaggtaaaagagatattc
tccgatacagggttaagcaaagaggtgaatcgtgcgacaagcctgcgtaacttcatcaaa
atggctttggttgcccggggtgacctgatactggaggacctttcccaggatgctatttct
gctattgacaaaacaccgctcatttcctccgtcaaagagctcaggatcaattttgaaaag
aacggcgtactgcttctcaacacggcactcatctttacggataaaaaaagctctacaaaa
catgtcaaagcctggagacctttcgtacagagcctcctgctttcccttgaagcccaacag
ccaaagctcattcttttcggaacccatgccaaagagcttcaaaaacatttaccgcttgaa
aactttgaaacgatcgagctggaacatccctataaccacactttcatcagcaatcccaaa
gcactgacacttttcggtccgatgagactacttgataaataa
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