Sulfurovum lithotrophicum: YH65_00970
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Entry
YH65_00970 CDS
T03877
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
slh
Sulfurovum lithotrophicum
Brite
KEGG Orthology (KO) [BR:
slh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slh03032
]
YH65_00970
03400 DNA repair and recombination proteins [BR:
slh03400
]
YH65_00970
Enzymes [BR:
slh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
YH65_00970
DNA replication proteins [BR:
slh03032
]
Prokaryotic type
DNA Topoisomerases
YH65_00970
DNA repair and recombination proteins [BR:
slh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YH65_00970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Zn_ribbon_recom
Toprim_4
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AKF24133
UniProt:
A0A7U4RPT7
LinkDB
All DBs
Position
complement(195188..197386)
Genome browser
AA seq
732 aa
AA seq
DB search
MKNLIIVESPAKARTISSFLGKDYKVIASKGHIRDLPKSTFGITIDDETGNLIPKYSIPR
DANPTVKELKKLAKEAETIYIATDEDREGEAIGYHIAKAIGKEPTELPRIVFHEITKSAI
QHALEHPRKVDMDSVDAQQTRRLLDRIVGYKLSPLLASKIQKGLSAGRVQSSTLKIVVDR
EREIKAFKPEEYWTIDALFEKKIDASIYDYNGLKIDKLTIKTDADANEIVASAKGESFVV
SSIEKTKRKTKTPPPFMTSTLQQAASTQLGFSPKKTMMVAQKLYEGVKTDKGTMGIITYM
RTDSLNLAKEAVDAARTHIKETYGNKYLPAKAKHYASKSKGAQEAHEAIRPTRVDFDSTQ
AANFLGADELKLYRLIYNRFLACQMTEAELESQTILFKGEKCTFKASGRKLLFDGFYKVT
GYGEKDKLLPELKKGQPVSLDDIKAEQHFTEPPPRYNEASLIKKLESLGIGRPSTYAPTI
TILQTRKYIEIEKKRIHPTEIAFTVIEMLEKHFPEIVDSNFTANMEETLDKVAEGKTDWQ
TILKEFYTPFLQKIEEGKKSIKSLKVATPTGENCPKCGSELLLRKGRYGEFIACSNFPKC
KYTKNTDGTEVEQPEETDEKCEKCGSPMVIKNSKRGKFLACSAYPKCKNAKSLTPPKTLS
VPCPECGGKLQEREGRRGKFFGCENYPKCKFIANFEPVDKKCPECGYTMGKKTLRGKEVY
ECFKCKHKEEVQ
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctaattatcgtcgaatcaccagcaaaagcacgcaccatcagcagttttttg
ggcaaggactacaaggtcatcgcctccaaaggacacatcagagaccttcctaaaagcacc
ttcggtatcactatcgatgatgaaacaggcaaccttatccccaaatactccatccccaga
gatgccaaccctacggtcaaagagctgaaaaaacttgccaaagaggccgagaccatctat
atcgcgaccgatgaggaccgtgagggagaagccatcggctaccacattgccaaagcgatc
ggcaaagaacctaccgagctgccgcgtatcgtctttcacgagatcaccaaatcggccatc
cagcatgcactcgagcatcccagaaaagtagatatggactcggtagatgcacaacagaca
cgccggctgcttgaccgtattgtgggctacaagctctcaccactgcttgccagcaagata
caaaaagggttgagtgccgggagggtacagagttctacactgaagatcgtagtcgacaga
gaacgtgagatcaaagcctttaagcccgaagagtactggaccattgatgccctgttcgaa
aagaagatcgatgcctccatctatgactacaacggcctcaagatcgacaaactgaccatc
aaaacagatgcggatgcaaacgagatcgtggcctctgccaaaggtgaatcttttgtggtc
tcctccattgaaaagaccaaaagaaagaccaagacaccccctccattcatgacctctacc
cttcagcaggcagcctctacacaactgggcttctcaccaaaaaagacgatgatggtcgcc
cagaagctctatgaaggagtgaagacggacaaagggactatgggtattatcacttatatg
aggactgactcactcaatcttgccaaagaagcggttgacgcggcacgtacacatatcaaa
gagacctacggcaacaaataccttcccgccaaagcaaagcattatgcaagcaaatccaaa
ggagcacaggaggcacacgaagcgatccgccctacccgtgtcgattttgacagtacccag
gcagccaatttcctgggtgccgacgaactcaagctctaccgtctcatctacaaccgtttt
cttgcctgccagatgaccgaagcggaacttgaatcacagaccatccttttcaaaggagag
aagtgtaccttcaaagccagcggaagaaaactgctttttgacggtttctacaaagtgacg
ggatacggtgagaaagacaaactgcttcccgaactgaaaaaaggacagcccgtctctctc
gatgatatcaaagcggagcagcactttaccgaaccgcccccgcgttataacgaagccagc
ctgatcaaaaaactcgaatctctaggcattggccgtccaagtacctatgcccctaccatc
actattcttcagacacggaagtatatcgagatagaaaagaagcgtatccaccctacagag
atcgcatttaccgttatagagatgcttgaaaaacactttccggagatcgtagacagtaac
tttactgcaaatatggaagagacactggacaaggtagccgaaggcaagaccgactggcaa
accatcctcaaagagttctacaccccgttccttcagaagatcgaagaagggaaaaagagt
atcaaaagcctcaaagtggcaacaccgactggcgaaaactgtcccaagtgcggctccgaa
ttgttactcagaaaaggtcgctacggggagttcattgcctgcagtaattttcccaagtgc
aaatacaccaaaaatacagatggtactgaagtcgaacagcccgaagagaccgatgaaaaa
tgtgagaagtgcggctcacccatggtgataaaaaattccaaaagagggaagtttcttgcc
tgttctgcctacccaaagtgtaaaaatgccaaatcactcaccccacccaaaacattgagt
gttccctgcccggaatgtggagggaaacttcaggagagagagggaagacgcggcaaattc
tttggctgtgagaactatcccaaatgcaagttcatcgccaatttcgaacctgtcgacaaa
aaatgccccgaatgcggttacacaatggggaaaaagacactgagaggcaaagaggtatat
gagtgcttcaagtgtaaacacaaagaagaggtacaatag
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