Sulfurovum lithotrophicum: YH65_01945
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Entry
YH65_01945 CDS
T03877
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
slh
Sulfurovum lithotrophicum
Pathway
slh03030
DNA replication
slh03430
Mismatch repair
slh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YH65_01945
03430 Mismatch repair
YH65_01945
03440 Homologous recombination
YH65_01945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slh03032
]
YH65_01945
03400 DNA repair and recombination proteins [BR:
slh03400
]
YH65_01945
Enzymes [BR:
slh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YH65_01945
DNA replication proteins [BR:
slh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YH65_01945
DNA repair and recombination proteins [BR:
slh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YH65_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_14
AAA_22
AAA_19
AAA_30
AAA_5
DNA_pol3_gamma3
Mg_chelatase
RCF1-5-like_lid
AAA_16
Glyco_tranf_2_5
UPF0242
AAA_24
AAA_assoc_2
Rep_fac_C
Motif
Other DBs
NCBI-ProteinID:
AKF24295
UniProt:
A0A7U4LZV8
LinkDB
All DBs
Position
complement(394355..396349)
Genome browser
AA seq
664 aa
AA seq
DB search
MSLALARKYRPATFDDLIGQDSVSQTLSLALDGNRLSHAYLFSGLRGSGKTSTARIFAKA
LLCEEGTTSHPCGTCTHCIMAAENRHMDIIEMDAASNRGIDDIKDLIEHTKYKPSSARYK
IFIIDEVHMLTNQAFNALLKTLEEPPDFVKFILATTDPLKLPATILSRTQHFRFKKIPQN
LVLSHLEHIMNLEKIEYEKEALEIIARSGAGSLRDSLTLLDQAIVYSKNFVDVGTVTGML
GIIEPSLLEELLGDIVKKDITKILEFIKLASDYEAEMILDELTLYLKELLLTGSGQLNPM
IIERFFRVIAESKSLLALGSDGEFVLSLALFKMMEALEIKDIDTMIRGLEKELKGVEVSE
IMVSTPVPDLSTPSEVITITEEEIVATLPKVSVEPPAPSEAKETVNEQTSQSRAQETENK
EETTKVTEQSVETTAAPLNIQETQQTQAEEQVQTSVTEENIASPEKTESAKEPARQSQQP
VDNSSKEKFKQLIAKIYDRNYDLGSCFERNIEFESFSENRLTWNSTAEGNEKKMLVNNWG
LINMFVKELFGYETKIVNIAKKKTITTSSEQVAGNNEGADSEEISSLNVQHSTLNTQPAK
PVHNDADTGSMIEDVEMKSSCIAPEAGETEAAQEKDPSTLLEEPMVKAAMELLNPKKVRI
KKNV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
ttgtcattagccttagcaagaaaatatcgtcctgccacctttgatgacctcatcggacag
gattccgtctcccagacgctctcgcttgcacttgatggcaacagactctctcatgcctat
ctcttctccggtctcaggggaagcggcaagacctccactgcccgtatttttgccaaagcg
ctgctctgtgaagagggaaccacctctcacccgtgcggtacctgtacccactgtatcatg
gctgcggagaaccgccatatggacatcatagaaatggatgctgcctccaacagaggtatc
gacgatatcaaagacctcatcgagcataccaaatacaaacccagctctgcacgctacaaa
atcttcattatcgatgaagtccatatgctgaccaaccaggcctttaacgctttacttaag
accctggaagagccgcccgattttgtcaaattcattctggcaacgaccgatccgctgaaa
ctacctgcgaccatcctctccaggacacaacacttcaggttcaagaagatcccccaaaat
cttgtactcagtcaccttgagcatatcatgaaccttgaaaagattgagtacgaaaaagaa
gcgcttgagatcattgcccgttcgggtgcggggagtctgagagattcactcaccctctta
gaccaagccatcgtctactccaagaacttcgtagatgtcggtacggtcaccggtatgctt
gggatcatcgaacccagcctgctggaggaactgcttggcgatatcgtaaaaaaagacata
acaaagatactcgaattcatcaaactggcctcggactacgaagcggagatgatcctcgat
gaactgaccctgtatctcaaggagcttttgctgacgggaagcggccagcttaatcctatg
atcattgaacgttttttccgtgtcattgcagagtcaaaaagccttctggccctgggaagt
gacggagagtttgtcctctctctggcactctttaagatgatggaagcccttgagattaaa
gatatcgacactatgatacgcggcctggagaaagaactcaaaggcgttgaggtaagcgag
atcatggtctccacacctgttccagacctctctactccctccgaagtcattaccattaca
gaagaggagatcgttgcaactcttcccaaggtgagcgttgaacccccggctcccagtgag
gcaaaagaaacggtcaacgagcaaacaagccaaagcagagcacaggaaacagagaacaaa
gaagagacaactaaagtcactgaacaatccgtagagacgacagccgcccctctcaacata
caggaaacacaacagacccaagcagaggagcaggttcaaacttctgtaacagaagagaac
atagcaagtcctgaaaagacagagtcagcaaaagagcctgcgaggcagtctcagcaaccg
gtagacaatagcagcaaagagaagttcaaacagcttattgcaaagatctatgaccgaaac
tacgatcttggaagctgttttgaaagaaatatcgaatttgaaagtttcagcgagaacagg
ctgacatggaactccaccgcagaaggtaacgaaaaaaagatgctggtcaacaattggggt
ctcatcaatatgttcgtcaaagagctcttcggatatgaaacaaaaatagtcaatatagcc
aaaaaaaaaacgataacaacgagtagtgaacaggtagcaggtaacaacgaaggagctgat
tcagaagaaatttcttctctaaacgttcaacactcaacgctcaatactcaaccggccaag
ccggttcataatgatgctgatacaggatctatgatcgaagatgttgagatgaaaagctcc
tgtattgctccggaagcaggagaaacggaagcagcccaagaaaaagatccctcgacactt
ctcgaagagcctatggtcaaagcagcaatggaacttttgaatcccaaaaaggtcaggatc
aagaagaatgtgtag
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