Sulfurovum lithotrophicum: YH65_04790
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Entry
YH65_04790 CDS
T03877
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
slh
Sulfurovum lithotrophicum
Pathway
slh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YH65_04790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slh03400
]
YH65_04790
DNA repair and recombination proteins [BR:
slh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
YH65_04790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AKF24777
UniProt:
A0A7U4M0X6
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Position
complement(984591..985325)
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AA seq
244 aa
AA seq
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MAKYVLFDTETTGNQEADRIIQIGAMIVHSKDEIEVFDELCSTQVPISIEAMEVHNITPD
VIADKPAYSETAFARRVQELNTTENYLIAHNISFDLGMLEKEGFVNHYTLIDTVRCAKHL
LPDSPYHRLQYLRYSLGLYKTEAQEAQKLGITIKAHDAIGDVLVMKLLLSKLVTLTQERF
PGINPMQKMAELTQTPVLMKTFKFGKYKDREIEEIAREDRGYLQWMRNNLDLDEDMKYTL
DQYL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatacgtactgttcgacacagagaccacaggcaaccaggaagcggaccgcatc
atacagatcggagcgatgatcgtacactcaaaggatgaaatagaggtttttgacgaactc
tgttccacacaggtacctatcagcatcgaagcgatggaggtacacaatatcacacctgat
gtcattgcagacaaacccgcctacagtgaaacagcctttgccagaagagtgcaggaactc
aacacaacggaaaactacctgatcgcccacaatatctcgtttgacctcggtatgcttgag
aaagaagggtttgtcaaccactatacgctgatagacaccgtacgctgcgccaaacatctt
ctgccggacagcccctaccatagacttcagtacctgcgctactcattgggactctacaaa
acagaagcccaggaagcacagaaactcggcatcaccatcaaagcacacgatgccatcggc
gatgtactggtgatgaaactgctgctctccaaactggttacactgacccaggaacgtttt
ccgggaatcaaccccatgcagaaaatggcggaacttactcaaacgcctgttcttatgaaa
acgttcaaattcgggaaatacaaagaccgcgagatcgaagagatcgcccgtgaagacaga
ggttatctccagtggatgagaaacaacctcgatctcgatgaagatatgaaatatacgttg
gaccagtatctgtaa
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