Sulfurovum lithotrophicum: YH65_09260
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Entry
YH65_09260 CDS
T03877
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slh
Sulfurovum lithotrophicum
Brite
KEGG Orthology (KO) [BR:
slh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slh03016
]
YH65_09260 (truB)
Enzymes [BR:
slh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
YH65_09260 (truB)
Transfer RNA biogenesis [BR:
slh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YH65_09260 (truB)
Prokaryotic type
YH65_09260 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Rol_Rep_N
Motif
Other DBs
NCBI-ProteinID:
AKF25543
UniProt:
A0A7U4RR42
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All DBs
Position
1884465..1885325
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AA seq
286 aa
AA seq
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MNRLFVVNKPIFRTSNGYMGYVKRKYNTKKVGFSGTLDPFATGCLIVATGQYTKLFQYLD
KTPKSYKATLWLGANSPSLDIEKVDSIKDAPLFDQAAIEMILDSLKGELTYYPPKFSAKK
VNGKRAYELAREGKEIDLKQITSTIYEIKLITYNHPFIHFEATVSEGTYIRSLGALISDR
LDVDATLSSLHRIHEGAFCYDNEKALNPFDYLSIPKNIYTGDDEYLELGKKLSVDYFEAK
ENGIYLIETSNFFSIIEIIGEAVKYRFNRIPKFEGDACTASEHTQK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggttatttgtcgtcaacaaacctattttccgcacctccaacggatacatggga
tatgtcaaaagaaaatacaacacgaaaaaagtagggttttccggtacgctggatcctttt
gccacgggttgcctcattgtggctacgggacagtacaccaaactcttccaatacctcgat
aagacacctaaaagctacaaagccactttatggcttggagcaaactcccccagtctcgat
atcgaaaaggtcgactccataaaggatgcaccactgtttgatcaggcagctatagaaatg
attttggactccctcaaaggcgaactgacctactatcctcccaagttctctgcaaaaaaa
gtcaacggaaagagggcctatgaactggcacgcgaaggaaaagagatagacttaaagcag
atcacatcgaccatctatgagatcaagctgattacctataaccatcctttcatccatttt
gaagcaacggtgagtgaagggacctatatccggagcctcggtgcgctcatctcagacaga
ctggatgtagatgccacactctcctctttgcaccgtatccatgaaggggcattctgctat
gacaatgaaaaagcgcttaacccttttgactacctttccattccaaaaaacatctacaca
ggggatgatgaatatcttgaacttgggaaaaaactctctgtcgattattttgaggctaaa
gagaatggtatttacctcatagagacttcaaactttttctccattattgaaatcatcggg
gaagcggtgaaataccgatttaaccgcatacctaaattcgagggggatgcatgtacagca
tcagagcatacgcaaaagtaa
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