Spirosoma linguale: Slin_0032
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Entry
Slin_0032 CDS
T01156
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sli01011
]
Slin_0032
Enzymes [BR:
sli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Slin_0032
Peptidoglycan biosynthesis and degradation proteins [BR:
sli01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Slin_0032
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Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-GeneID:
8723760
NCBI-ProteinID:
ADB36106
UniProt:
D2QBC4
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Position
complement(37215..38456)
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AA seq
413 aa
AA seq
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MRMVVLMLSGLLLNIPISAQKKASTAKNRPNLSSAHKRSLSGPGRLHFCGEVVPTEQGNV
SAKLAFAMASSSGYARRLNALKARSAPFFSVIEPILERYGIPDDFKYLPLIESAWQANAV
SSAGAVGYWQFMDDTAQDMGLSIAPGHDERTNLLKSTEAACKYINFLYRKLGSWTLVAAA
YNGGVGMVQRKITKVGHRDYYTMAMNPETGYYLYRILAMKQLFTNPSYGIDAVGLMLASG
GNAYEQEREQARRMGWLQDQEPAVSGIPVESLSGPDALLNDQVPTGRHEVVVMDSLLSKL
LKNTPSSPSAVVGDVAARLVQAGQVKVGQSWSFALTETVQIDESTLKAGDMLYAIIDDID
TYGNLFFRATKAISAQTKTTIPLTLIALNPATGLAGIPRPKVVKPGWVVQWKL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatggtcgtactgatgttaagtggtttactgctgaacatccctatctcggcgcaa
aaaaaggcgagtacggcaaagaacaggcccaatctttcttctgctcataaacgttcgtta
agcggaccgggacgtctgcacttctgcggtgaagtcgtaccaactgaacagggtaacgtt
tcggccaagctggcctttgccatggcgagcagttcgggatatgcccgtcgcctgaatgcc
ctgaaggcccgttcggctcctttcttctccgttatcgagcctattcttgagcggtacggt
atcccggatgattttaagtacctgcccctgatcgagagtgcctggcaggccaacgccgta
tcctcggccggagcggttggctactggcagtttatggacgataccgcacaggatatgggg
ctgtcgattgcccccggccatgatgaacgcaccaacctcctcaaatcaaccgaagccgcc
tgcaaatacatcaatttcctgtaccgcaaattagggtcatggacgcttgtggccgcagcc
tacaatgggggcgtgggcatggttcaacggaaaatcaccaaagtgggccatcgcgattat
tataccatggccatgaatcccgaaaccggctattatctctaccgtattctggccatgaaa
cagctattcacgaatccctcctatgggatcgacgcggtgggcctgatgctggcatcgggt
ggtaacgcctacgaacaggagcgcgaacaggcccggcgaatgggctggcttcaggaccag
gaaccagcagtgagcgggattccggtcgagtcgttgtcgggtccggatgctttgctaaac
gatcaggtaccaacgggccgacatgaagtggtggttatggacagtttgttaagcaaacta
cttaaaaacacgcccagtagcccctctgccgttgttggcgatgtagctgcgcgtctggta
caggcgggtcaggtgaaagtaggccaaagctggtcatttgcactcaccgagacggtccag
atcgacgaaagtacgctcaaggcgggcgatatgctttacgctattatcgatgatattgat
acctacggcaatcttttctttcgggcgaccaaagccatctcggcacaaaccaaaacgact
attccgcttacactcatcgcgctgaacccggcaaccggtttagccggtattccgcgcccc
aaagtggtaaaacctggctgggtagtgcaatggaaactttaa
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