Spirosoma linguale: Slin_0046
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Entry
Slin_0046 CDS
T01156
Name
(GenBank) OmpA/MotB domain-containing protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_0046
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_0046
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
CarboxypepD_reg
DUF748
Motif
Other DBs
NCBI-GeneID:
8723774
NCBI-ProteinID:
ADB36120
UniProt:
D2QBD8
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Position
complement(58840..60138)
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AA seq
432 aa
AA seq
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MFGTYPSGYPSGGGQQYPSGGQQSPDDTYPNSGNQPGNGRPADPGVTVNSIRLTQDYTIL
NLTYTERGKPRYDQNGRLIPTGYIEFDPAGQLVAANGARKFGFLKIEGLPLKPQRLRTYS
GDQVTFTIYFERLDKGLENFDLFECNDYDLIVCWNIYNLHVRNPADVVVYTPPATPAPAP
TPVPKLPKKQTPLPQPSGESGGEMETPRTDVPKKETLKPAPAPVPTLVSVSGIVSDAKSK
RPVTATIDYQLSSSKQAIDSVQSFASTGAYRMSLNKGQVYTYIASARGYQSASGVLDLSK
VAGGQKLTRDIALTPLAVGDKVTLKNIYFEMSKSNLLSASFAELNKLVSMMQDNPNMSIR
LEGHTDIIGDHDKNLQLSRDRVIACQRYLVQQGIDIDRIQTIGYGDTRPILTKGTDEERK
VNRRVEFVILAI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcacgtatccatccggttacccatcgggcggtgggcagcagtacccgtccggt
ggccagcaatcgccggatgatacctatcctaattcgggtaaccagcccggtaatggtcgc
cccgccgaccccggcgtaacggtcaacagcattaggttaacacaggattacacgattttg
aacttgacgtacaccgaacgaggaaagcctaggtatgaccaaaacggcagactgatacca
actggttatattgaattcgacccggcggggcagttagtagccgcgaatggtgcccgtaag
tttggcttccttaaaattgaaggacttcccctgaaaccgcaacgacttagaacgtattcg
ggtgatcaagttaccttcacgatctatttcgagcgattagataaagggttggaaaatttt
gacttgtttgaatgcaacgattacgacctgattgtatgctggaacatctacaacctccac
gtccgcaaccccgccgacgtagttgtctatacgccacccgcgacgccagcgccagccccc
acacctgttcccaagctgcctaaaaagcagaccccattaccgcagccatccggtgaatcg
ggcggtgaaatggagacgccccgaacggatgttcccaaaaaagaaacactcaaaccagct
ccagcccctgtacccacgttggtgtccgtgtcgggcattgtaagcgatgcgaaaagcaaa
cggcccgtaacggcaaccatcgactatcaactatcgtccagcaaacaggccattgattca
gtgcagagctttgcctcaacgggggcctaccgcatgagccttaacaaaggacaggtatac
acctacattgcctccgcgcggggctaccagtcggccagcggtgtgctggatttgagcaaa
gtggcgggtggacaaaaactaacccgcgacattgccctgacgcccctggccgtgggcgac
aaggttacgcttaaaaacatttacttcgaaatgtcgaagtccaatctgctgtcggcctcc
tttgctgagttgaacaagctggtctccatgatgcaggataacccaaacatgagcatccgg
ctcgaagggcataccgacatcatcggcgaccacgataagaacctgcaactctcccgcgac
cgggtcattgcctgccagcggtatctggttcagcagggcatcgatatcgaccgcatccag
accatcggctacggcgacacgcgaccaattctcaccaaaggaacggatgaagaacgaaag
gtgaaccgccgggtcgagtttgtcattctggcaatttga
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