Spirosoma linguale: Slin_0287
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Entry
Slin_0287 CDS
T01156
Name
(GenBank) phenylalanyl-tRNA synthetase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sli
Spirosoma linguale
Pathway
sli00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Slin_0287
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sli01007
]
Slin_0287
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sli03016
]
Slin_0287
Enzymes [BR:
sli01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Slin_0287
Amino acid related enzymes [BR:
sli01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Slin_0287
Transfer RNA biogenesis [BR:
sli03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Slin_0287
Prokaryotic type
Slin_0287
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
8724015
NCBI-ProteinID:
ADB36351
UniProt:
D2QDC1
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All DBs
Position
complement(377501..379945)
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AA seq
814 aa
AA seq
DB search
MEVSYKWLQEFIELPESPEEVGKILTATGLEVEGIEKIDAVPGGLAGVVIGQVLTCTKHP
DADKLSLTTVDVGAEQPLPIVCGAPNVAAGQKVIVALVGATLYPSAGEPFQIKKAKIRGA
ASEGMICAEDEIGLGTSHAGIIVLDPDGPASQLPNGTPAARYFNLESDYQIAIGLTPNRI
DAASHYGTARDLKAVLKRPLRLPSVDAFAVAGTDLTLDVRVEDATACPRYAGVTLNGLTV
GESPDWLKQRLLSIGLNPINNVVDVTNYVCHDLGQPLHAFDAARIAGGKVIVKTLPEGTP
FITLDGVERKLTATDLMICDAEKPMCIAGVFGGQYSGVSAQTTSIFLESAYFSPTSVRKT
AQHHGLKTDASFRFERGIDPNITVFALKRAALLIQQVAGGTVSSAITDIYPTPIESFRVP
VRYRNIDRLIGIKIDHSEIHRILEALDIQAEEKTDDGFLAIVPPYRVDVTREADVIEEIL
RIYGLDNVPLSVNLAADSLSEFPKTDPDQWQSRVGQLLAANGFYEILTLSLTRPAYNDAI
RSSLPGEDVTLLNPLSEELSVMRQTLLFSALETMLYNLNRRQKDLKTFELGKVYHKVKLD
DSTTKYVERVRMSLAILGNQQPENWLQKAQPVAFHDLATAVQRILNLFRVKAYETQPADT
TLFQYGVTYVVNKKPLVSLGLVNPKLTKLVDLKQPVFYADFDWQALLKLATTKVRYEEVS
KFPEVRRDLSLVLDQAISFEQISKLARQTERKLLRSVNVFDVYEGENLGAGKKAYSVSFM
LQDTAQTLTDATIDKTMQRLMTTFEQELGAVIRK
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaagtttcctataaatggttacaagagttcattgaattacccgagtcgcccgaagaa
gtcggtaaaattttaaccgcaacgggacttgaagtcgaaggaatagaaaagatagatgct
gtacccggtggactggcgggtgtagttattggccaggtactaacctgcactaaacatccc
gatgccgataaactgagcctgactacggttgatgttggagccgaacagcccttacccatt
gtgtgtggtgcacctaatgtggcggctggccagaaagtgattgtcgcactggtaggggcc
acactttacccaagcgccggtgaaccttttcagatcaagaaagccaaaattcggggcgca
gcttccgaagggatgatctgtgccgaagacgaaattggtctgggcacatcccacgcaggc
attatagtgctggacccggacggtccggcatcccagctgccgaacgggacgcccgcagcc
cgttatttcaacctcgaatcagattatcaaattgccattgggttaacgcctaaccgcatc
gatgccgcgtctcattacggcacagcgcgcgatctgaaagctgtgctcaaacggcccctt
cgcctaccctccgtagacgccttcgccgtagctggcacagacctgacgctcgatgtacgc
gtggaagatgcgacagcctgcccgcggtacgccggggttacgttaaatggcctgaccgtt
ggcgaatcgcccgactggctgaagcaacggttgctgagtattgggcttaatcccatcaat
aacgtcgtcgacgtaaccaattacgtttgtcatgaccttggccagccgcttcatgcgttc
gatgccgccaggattgcaggcggtaaggtcatcgtgaaaacattaccggagggtacgcct
tttataacccttgatggcgtagaacggaaactaacggctaccgatcttatgatctgcgat
gccgaaaagccgatgtgtattgccggtgtttttggcggtcagtattcgggtgtatcggct
caaacgaccagcatcttcctggaatctgcttatttctccccaacgtctgttcgtaaaaca
gcccagcaccacggactgaaaacggatgcgtcgttccggttcgagcggggcattgacccc
aacataacggtatttgccctgaaacgggctgccctgctcattcagcaagtggccggtgga
acggttagttcagctattaccgatatttacccgactccgatcgagtcattccgggtgccg
gtgcgttaccgcaatatcgatcgactaatcggcatcaaaatcgaccattctgagattcat
cggatattggaagcactggacattcaggccgaagagaagaccgacgacggattcctcgcc
attgtgcctccttaccgcgtcgacgtaacacgggaggccgatgttattgaagaaatactc
cgaatatacgggcttgataacgttcccctgtcggtaaacctggcggctgattcgttatcg
gaattcccgaaaacagaccctgatcaatggcaaagccgggttggccagctactggcggcc
aatggcttttacgaaatcctgaccctatcactaacccgtccggcctataatgatgccatc
cggtcgtcattgccgggcgaggacgtaacgctgctcaatcccctcagcgaggagctgtct
gttatgcggcaaacgctgctgttctcggcgctcgaaacgatgttgtataacctgaaccgg
cggcagaaagacttgaagacattcgaattgggcaaggtttatcataaagtaaaacttgac
gattcgactacgaaatacgttgaacgggtacggatgagcctggctattctcggcaaccag
caacccgaaaactggcttcagaaagctcaaccggtggcgtttcatgacctggccacggcc
gttcagcggatactgaacctattccgggtcaaagcctacgaaacccaacccgccgacact
acccttttccagtatggcgtgacgtatgttgtcaataaaaaaccactggtcagtctggga
ttggtaaaccccaaactgacgaagctggtagacctaaaacagcccgtgttttacgccgac
ttcgactggcaggcgctgctcaaactagcaacgaccaaagtacgctatgaggaagtttcc
aaatttcccgaagttcgtcgtgacctgtcgctggtacttgatcaggccatttcgttcgaa
cagatcagtaagctggcccggcaaacggaacggaaattattacggtctgtgaatgtgttt
gatgtgtatgaaggagaaaatctgggtgctggcaaaaaagcctattcagtcagttttatg
cttcaggataccgcccagaccctcacggatgcaacaattgataaaacaatgcaacggctc
atgacgacttttgagcaggagttaggggcagtaattagaaaataa
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