Spirosoma linguale: Slin_0308
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Entry
Slin_0308 CDS
T01156
Name
(GenBank) alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
sli
Spirosoma linguale
Pathway
sli00511
Other glycan degradation
sli04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Slin_0308
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Slin_0308
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sli04147
]
Slin_0308
Enzymes [BR:
sli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
Slin_0308
Exosome [BR:
sli04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Slin_0308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
GHL6
F5_F8_type_C_2
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
8724036
NCBI-ProteinID:
ADB36372
UniProt:
D2QDE2
LinkDB
All DBs
Position
398165..399556
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AA seq
463 aa
AA seq
DB search
MLSYFTFNGMNRFLCTVVCTLLLLSSFVCYAQEKKGVVQPTPRQLAWQPLETTAFLHFTV
NTFTDKEWGDGTESPAIFNPTKLDARQWIKALKEAGFKMAIITAKHHDGFCLWPSKMTNH
SVKSSPWKNGKGDVVKEVADACREFGLKFGVYLSPWDRHEPRYGTAAYNDFYKSQLRELL
TNYGPISEVWFDGAKGENAKDMTYDFAGYWALVRQLQPNAVMFSDAGPDVRWVGNEAGNA
GETCWSTINTEGLAPGKADPGYLNRGDATGRQWVPAETDVSIRPGWFYHPSEDSKVRSAQ
NLVNLYYQSAGRNSLLLLNVPPNRDGLLSEPDIASLREFRRILDETFKQNLVGGQPSLTD
KKLTTFTTLSANQPLVISLGAEKSFDRMAIQENIANGQRIASGRVEYWDGSNWKPLQTFT
TVGYKRLLRFPAVTSSKLRLLISNANGPVQLAEIGVYKASSGE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctatcgtattttacatttaatggtatgaatcgttttctatgcacagtagtgtgtact
ctattgttgctaagttcattcgtttgttacgcacaggaaaaaaaaggtgtagtccaacct
acacctcggcagcttgcctggcaacctctggaaacaacggcttttctgcattttaccgta
aatacatttacggataaggagtggggggatggaaccgaaagcccggcaatttttaatccg
accaaactggatgcccggcaatggatcaaggccctgaaagaagccggattcaaaatggcc
attatcactgccaagcaccatgacggattttgtctctggccatcaaaaatgaccaatcat
tccgttaagagcagcccttggaaaaatggtaaaggagatgtagtaaaagaagtagccgat
gcctgccgcgaatttggtctgaaattcggcgtttatctgtcgccctgggatcggcacgaa
ccccgctatggcacggctgcttacaatgacttttataaaagtcagctccgtgagttgctc
accaattacggacccatatccgaagtttggtttgatggggctaaaggcgaaaatgctaaa
gatatgacctacgattttgccggttactgggcgctggttcggcaattacaacccaatgcg
gttatgttttccgatgccgggcccgacgttcgctgggtgggtaacgaagccggtaatgcc
ggtgaaacatgctggtctaccatcaatacggaagggctggcacccggtaaggccgatcca
ggatatttaaaccggggtgatgccaccggcaggcaatgggtaccggccgaaacggacgtg
tctattcggccgggatggttttatcacccgtccgaagattcgaaagtacgttcggcccag
aatctggtgaacctgtactatcagtccgcaggccgtaatagcctgttgttactgaatgtt
ccacccaatcgggatgggttgctttcagaaccggacatcgctagccttcgggaattcaga
cgtattcttgatgagaccttcaaacaaaatctggttggcgggcagccgtctttaaccgat
aaaaaactgacgacgtttaccacattatcggctaatcagccccttgtcattagtttgggc
gcagaaaaatcgttcgaccgaatggccattcaggaaaacatcgccaacggccaacgtatt
gccagcggtcgggtcgagtactgggacggctcgaactggaagccgctccagacatttacg
actgtaggctataaacggcttttacgctttccggctgttacgtcgtctaaattgcggttg
ttgatttctaacgccaatgggccggtacaactggccgaaatcggggtatataaagcttcg
tccggggagtaa
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