Spirosoma linguale: Slin_0393
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Entry
Slin_0393 CDS
T01156
Name
(GenBank) OmpA/MotB domain-containing protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_0393
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_0393
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF748
Pro_Al_protease
Phage_tube_C
Motif
Other DBs
NCBI-GeneID:
8724121
NCBI-ProteinID:
ADB36457
UniProt:
D2QEA2
LinkDB
All DBs
Position
495480..496679
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AA seq
399 aa
AA seq
DB search
MFLQKGKIFLALVACLLVMGSGMAQRRDVDYSRIKATPSARPVMASPVQSGRTANPSILT
IKAFAVDISKPLTAAIASITSRTTGKTQVLSLANGRIEQVFNEPDVLAIEVSGDGYTTAF
RSMTIAVSSTGNRYEFDAQLDPAPIKLTVWAVDSRTNKLIHDARFTISGKAGKTTLLLTP
DSTTGLVKTDLPGKGVYQLTSSANGYGDFTKSIRLDSVQSEARVMLTPKKAPDITKTQAL
PEAVVKSAKTAYVETPTAKPAIKVPVLSSNLPMPAVTNKPFGPLEKGKAIPLRNIYFDQS
SPVLRPESSTELDQLAAVLLESPTTKIEIRGHTDNQGDFDSNVKLSRDRCQAVIDYLASK
GIAKNRLKAVGRGPIDPVAPNNNEENRKKNRRVEVVPVL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgttccttcaaaagggaaagatatttctggctttagtagcctgtttactggttatgggc
tctggcatggcccaacggagggacgttgattattcacggatcaaagcgacacccagtgcc
aggccggtgatggcttctcctgttcaatccggacgcacagccaatccaagcattttaacc
ataaaagcattcgccgttgatattagtaagccgctgacagcggctattgccagcataacc
tcccgaacaacgggtaagacacaggtgctttccctggcaaacgggcggattgagcaggta
tttaacgagccggatgtgttagcgattgaggtaagtggagacggctatacaacagctttt
cgaagtatgacaatagctgtatcgtcaaccggaaaccggtatgagtttgacgcccagcta
gacccggctcccattaaattgactgtgtgggcagttgacagccggacgaataagctgatt
cacgatgcccgttttaccatttcgggtaaagctggcaagacaacgctcttgctgacgccc
gattctacgactggtttggttaaaacggatttgcccggcaagggcgtttaccaattgacc
agttcagccaatggctatggcgattttacaaagtccattaggctggatagtgtacagagc
gaggcacgggttatgctgacgcctaaaaaagcgccggacatcacaaaaacacaagcgctc
cccgaagccgtagtaaaatcggcaaagacagcctatgtggagactccgacggcaaaacca
gcaataaaagtgcctgttctttccagcaatctaccgatgcctgctgttacgaataagccg
tttggccctctcgaaaaagggaaagccatcccgctcaggaacatctacttcgaccagagt
tctccggttttgcggccggagtcttccacggagctcgaccaattggcggctgtattactg
gaaagcccaacgacaaaaatcgaaatccgtggacataccgataaccagggcgattttgac
tcaaatgtaaaactctcccgcgaccgctgtcaggcggttattgactacctcgccagtaaa
ggaatcgccaaaaatcgtctgaaagccgtcggtcgtggtcccatcgaccctgttgccccg
aataacaatgaggaaaaccggaagaagaaccggcgggtggaggtagtgcctgttctctga
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