Spirosoma linguale: Slin_0506
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Entry
Slin_0506 CDS
T01156
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sli03400
]
Slin_0506
DNA repair and recombination proteins [BR:
sli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Slin_0506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
Lon_C
AAA
AAA_22
nSTAND_NTPase5
AAA_5
AAA_16
NACHT
AAA_24
nSTAND3
AAA_14
NTPase_1
SLFN-g3_helicase
DZR
DUF7129
ABC_tran
AAA_19
AAA_18
Rad51
Motif
Other DBs
NCBI-GeneID:
8724234
NCBI-ProteinID:
ADB36570
UniProt:
D2QF93
LinkDB
All DBs
Position
622055..623440
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AA seq
461 aa
AA seq
DB search
MAKLKTTFFCQSCGNQSAKWMGRCPACGEWNTIVEEVVQKDEPEKGGWRSPSSGPGGLKI
AAKPKAIHAINYEEQPRVTTTDGELNRVLGGGIVAGSLVLIGGEPGIGKSTLLLQIALSL
AGLRVLYVSGEESEQQIKMRAERLDAPTSDCHVMTETSTQNIFRVVEHFEPEVLIIDSIQ
TMQSSLVESGAGSVSQVRECTAEFMKYAKESGVPVFMIGHITKEGSLAGPKVLEHMVDTV
LTFEGDRHTTYRILRTTKNRFGSTDELGIYEMLGSGLRQVTNPSEILISQRDEALSGVTI
GSMLEGNRPLMIESQALVSVATYGTPQRSSTGFDAKRLNMLLAVLEKRGGFRLGQQDVFL
NIAGGLRVEDPAIDLAVCAAIVSSYEDIAIPPSVAFAAEIGLGGEVRAVSRIESRIAEAE
KLGFKKMFISKYNLKGLDTKSYKIDINPVSRLDEVFQGVLM
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttaaaaactacttttttttgccagagttgcggaaatcagtccgccaaatgg
atgggccgctgcccggcctgtggcgaatggaacaccatcgttgaagaagttgtccagaaa
gatgaacccgaaaaggggggctggcgcagtccgtcctccgggccgggtggcctgaagata
gccgctaagcccaaagcgattcacgcgatcaactacgaagaacaaccccgtgtgacgacc
accgatggggaactgaatcgggtactgggcggtggtatcgtggctggctcgctcgtattg
atcggtggagaaccgggcattggcaagtcaactctgctgttgcaaattgcgctgagtctg
gccggattgcgggtactgtatgtgtccggtgaagaaagtgaacagcaaataaaaatgcgg
gccgaacgcctggacgcacccaccagcgattgccacgtgatgaccgagacctcaacgcag
aatatcttccgggtggtcgagcattttgagccggaagtgctcattattgactccattcaa
acgatgcagtcgtcgctggtggaatcgggggcggggagtgtttctcaagtgcgtgaatgc
acggccgagtttatgaaatacgccaaagagagtggcgtaccggtattcatgattggccac
atcaccaaagagggatcgctggcaggtccgaaggtgctggaacacatggtcgacacggta
ttgacctttgaaggcgaccgccacacaacctatcgtattctacgtacgacaaaaaaccgc
ttcggcagcaccgatgagctagggatttatgagatgctcggctccggactccggcaggta
accaacccgtctgaaattctgatttcgcaacgcgacgaagccctcagtggcgttaccatc
ggctccatgctagagggcaaccgcccgctcatgattgagtctcaggcgctggtgagcgta
gctacctatggaacgccccagcgaagcagcaccggtttcgatgccaaacggctcaacatg
ctactggctgtacttgaaaagcgcggaggatttcggttgggccagcaggacgtgttcctg
aacattgcgggtggcctgcgcgtggaagacccggctatcgatctggctgtatgtgctgcc
attgtatcgagttacgaggatattgccattccgccatccgtagcttttgcggccgaaatt
ggtctggggggtgaagtgcgggccgtaagccggatcgagtcgcgcattgccgaagccgaa
aagctgggctttaagaagatgtttatctccaagtacaacctgaagggcctcgatacgaaa
agttataaaatcgacatcaatcccgtttcacgactggatgaggtttttcagggtgtgctg
atgtaa
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