Spirosoma linguale: Slin_0868
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Entry
Slin_0868 CDS
T01156
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_0868
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_0868
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
STN
MetallophosN
TTR_TEN1-4
CTD1
Motif
Other DBs
NCBI-GeneID:
8724598
NCBI-ProteinID:
ADB36923
UniProt:
D2QI35
LinkDB
All DBs
Position
1043470..1046823
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AA seq
1117 aa
AA seq
DB search
MSISINYLVTRRLVHKLLPLLLIAISINTVLASTTQELLDQRISVQLDNSTIRQALLKLE
KTAHVKFVYSRQIIHLDRKVSLVATEEKLAVVLERLLKPLRLQYMVSGSQIAIVPGASAP
DSILSESENTGNAGSFKRAGETADRVITGTVQSETGAGLPGVSVVVKNTTRGSTTNAEGN
YRLTIPDEATTLVFSFVGYQNQEVAIGNRTTVDVQLVPDNKALDEIVVVGYGTVRKSDLT
GSVASVKSEQLTAYPATGAVQALQGRAAGVQIQANNGEPGTSFKVRIRGGNSINASSDPI
FVVDGFVGGTLPPPEDIESIEVLKDASATAIYGSRGANGVVMVTTKRGKSGKARIDFNVS
HSFQKEIKRLNLLNADQFVSYLKEINPNYVSRGQNTDWQDQILRPGGIQNYQLSLSGGND
NVKYYISGAYFDQKGIVINSDFNRFSITSNIDVKVSDKLRVGLNVFGQRSNKAGVISQEL
SGGPAGTGVIASAYKFGPDLGIYDANGRFSIAAISDPIDNPYAIATQRQNNTVTDQTQGN
LFAEYQLRSDLKFRATLGTTTNTGRTGMYTPTTLNAGASVGGEASMTGFRNTLFQSENYL
SYDKSFGEAHRVGVVGGFSYQTSRNESWGGSGQSFISDALSYWNLGSSSVWQAPSSGLTD
WKLASWYGRINYALNDRYLVTVNARYDGSSTFSRNHKWAFFPSGAFAWNMGNESFMAGLP
WVSQWKWRASYGITGNQAISPYQTLARFSTVYAATNGVGVNAITPSSIANDDLTWETAAQ
FDLGTDISLFNNRLNLTLDYYRTITSNLLFSVPLPQYSGYTSQLKNIGKLQNQGFEVTLG
TRNLTGPLRWDMDVNFSLNRNKVLSLPGGKDIFYSSAPGHLIGLDQTQILREGAPVGSMF
GWIYDGVYQTGDAFLTGSGFEQTAGGEKFRDLDGNGAINSNDRTIIGNPNPKFIWGWTNE
FKWRNMDLNLFFQGSQGNDMLSYTLMELDLLSGINNATTNALNRWTPQNTNTNVPKASGA
RTRRVSTRWIYNASYARLKNLAVGYTFPKSFTSRAKISRLRIYASAQNILTITDYPGYDP
EVNYNSAGSANGNQNLGLDYGSYPNAKSYTVGLNIGF
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatatctataaactacctagtcactcgaaggcttgtgcataaattgctgccgttg
ttgctaatcgcgatatcgatcaatacagttctggcttcaactactcaggagttactggat
caacggattagcgttcagctggataatagcaccattcgacaggcactgctgaagctggaa
aagacggcccacgtcaagttcgtgtacagtcgacaaattattcatcttgaccgtaaagtt
tcactcgtggcaacggaggagaaactggcggttgtcctggaacgactgctgaagccgctg
cggttacaatacatggtttcaggcagccagattgccattgttccgggcgcttccgctcca
gactctatcctgtcagaatccgagaatacaggtaacgcaggttcgttcaaacgagcgggt
gaaacagccgatcgcgtcattacaggaaccgtgcaaagtgagacgggtgcgggcttgccg
ggagtgagtgttgttgtcaaaaataccacaaggggaagcacaacaaatgctgaaggaaac
tatagactgaccattccggacgaagcaactacgctggttttttcgtttgtaggctatcaa
aaccaggaagtcgccatcggaaaccgaacaacggttgatgtacagctagtacccgataat
aaggcactggacgaaatcgtggtggtgggctatggcacggtcaggaaaagcgatctgaca
ggatcagtggcctcggtgaaaagcgaacaactcaccgcttatcctgccacaggagccgtg
caggcgttgcagggccgggcggcaggagttcagattcaggcaaacaatggggaaccgggc
accagtttcaaggtgcgtatccgggggggtaattcgatcaacgcgagtagcgatccgatt
tttgtggtcgatggcttcgttggtggaacattacccccaccggaagacattgaatcgatc
gaagtattgaaagatgcttcagccaccgccatatatgggtcgcggggtgccaacggggtt
gtgatggtcactaccaaacggggtaagagcggtaaggcgcgcattgatttcaatgtctcg
cattcctttcagaaggaaattaaacggctcaacttactcaatgccgaccagtttgtaagc
tacctaaaagaaatcaatccgaattacgtatcacgggggcagaataccgactggcaggac
cagattctcaggcccgggggtattcagaattaccagctttcactatctggaggtaacgac
aacgtaaaatactacatttccggggcgtattttgatcagaaaggtatcgttattaattct
gatttcaaccggttttcgatcaccagtaatatcgatgtcaaagtctccgataagctgcgg
gtaggtctgaatgtgttcggacaacgcagcaacaaagctggcgtaatcagtcaggagcta
tcgggcgggccagcgggtaccggcgtgatcgcatcagcttataaatttggtcccgacctg
ggaatttacgatgccaacggtcggttttccattgctgccatttccgacccgatcgacaat
ccctacgctatcgctacccagcgccagaacaataccgttacggatcagacacagggaaat
ttgtttgctgaataccaacttcgcagcgacctgaaattcagagctaccttgggcacgaca
accaacaccggtcggacagggatgtacacgcccaccacactgaatgccggagcgtccgtt
gggggcgaagcctcgatgacaggttttcgcaatacgttgtttcagagtgagaactacttg
tcctacgacaaatcgtttggtgaagcccaccgcgtgggtgtggtgggcgggttttcctac
cagacttcccgcaatgagagctggggcggtagcggtcagtcgtttatcagcgatgccctc
tcgtactggaacctggggagttcgtcggtctggcaagctccttcctcggggttgaccgac
tggaaactggcctcctggtatggccggatcaattacgccctgaacgatcggtatctggtt
acggtcaacgcgcgttatgatggttcgtcaacctttagccgcaaccacaagtgggccttt
ttcccatcaggtgccttcgcctggaacatgggcaacgaatcgttcatggcgggtttgccg
tgggtaagtcagtggaagtggcgggccagttacggcatcacgggtaatcaggccatttca
ccctaccagacgctagctcgcttttcgacggtatatgcggccaccaacggggtaggcgtc
aacgctatcacaccatcgtccattgccaatgacgacctgacctgggaaaccgcggctcaa
ttcgatctgggcaccgacattagtttgtttaacaaccggctgaacctgacactcgactac
taccgtaccattacgtcaaatttactcttcagcgtccccctgccgcagtattcgggctac
acgagccagttgaaaaacatcggtaagctacagaatcagggatttgaagttacgctggga
acccggaatctgacaggcccgctccgttgggacatggacgttaatttttccctgaaccgc
aataaggtactgagtttacccggaggaaaagacattttctattcgtcggcaccggggcat
ctgattggactggatcaaacgcagattctgcgtgaaggtgccccggtgggtagcatgttc
ggctggatatacgatggcgtttaccagaccggcgacgcttttctgaccggctcaggcttt
gagcagacagctgggggtgaaaaatttcgggaccttgatggcaacggagctatcaatagt
aacgaccggaccattattggcaatcccaatccgaaatttatctggggctggaccaacgag
ttcaaatggcggaacatggacctgaatttgttctttcagggatcgcagggaaacgacatg
ctgagctacacgctcatggaactggacctattgtcgggaatcaataacgctaccaccaac
gccctgaatcgctggacaccccagaacaccaacaccaacgtgccgaaagcatcaggggcg
cgtacccgccgggtatcgacccgctggatttacaacgcaagttatgcacggctaaaaaac
ctggcggtgggctacaccttccccaagtcgttcaccagccgagctaaaattagtcgctta
cgcatctacgcgagtgcgcagaacatcctaacaataaccgactatccagggtacgacccg
gaggttaactacaactcggccggttcggcgaacggcaaccaaaatctgggacttgattat
ggtagctacccaaatgctaaatcatacaccgtaggactaaacattggcttttaa
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