Spirosoma linguale: Slin_1108
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Entry
Slin_1108 CDS
T01156
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sli
Spirosoma linguale
Pathway
sli00470
D-Amino acid metabolism
sli00550
Peptidoglycan biosynthesis
sli01100
Metabolic pathways
sli01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Slin_1108
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Slin_1108
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Slin_1108
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sli01011
]
Slin_1108
Enzymes [BR:
sli01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Slin_1108
Peptidoglycan biosynthesis and degradation proteins [BR:
sli01011
]
Precursor biosynthesis
Amino acid ligase
Slin_1108
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
GARS_A
ATP-grasp
AbiEii
Motif
Other DBs
NCBI-GeneID:
8724841
NCBI-ProteinID:
ADB37159
UniProt:
D2QK37
LinkDB
All DBs
Position
complement(1357954..1359609)
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AA seq
551 aa
AA seq
DB search
MKIGIFFGGPAREREVSFAGGRTALANLDKGLFEPVLVFVDGRGRFRLVSPDFLQSPSLH
DALPQDSSGFSVYDESLAVDTLDAILPELRPEQFRDHFDLAFLAMHGPDCEDGAIQGLLE
WHKMPYTGPGLVGSAVGINKILQNELIALANGQKKKTATISRDDYEQADKAQFFQSLVEH
LGLPIVIKAPHQGSSIGVAIVREADLAQFCRSVEQCFFTMSIQPDGWSKLSGWTSLSGTE
KHELAQKMVSLDSGISFPVVIEQTGEVIKHPADFVARLDALMAQSSQPITLASLNAEDEV
LFEEFITGQEFSCGVIQDDDQVAIALPPTEIYNVTSFDFESKYKLNTTKKRIPVETSLEN
NRKIQLAVAQVFTRLGINVYSRIDGFLTPAGDVLLHDPNTIPGMSPSSLIFKQMAEIGLN
LANSLTYLIRQSLRERIRTGKDTFHLKHLLAELDAQLAHRKANPLPERVVSFGSGDEEFI
AAKQQYNELAASGTVRPSLMYIKSKQESHEIPVNLLFKDTIAELETALSQPRHPLLLETA
ELARHITERYV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaataggcattttcttcggtgggccagcgcgggagcgtgaggtttcctttgcgggc
ggacgtaccgcactggctaatttggacaaaggcttattcgagccagttctcgtttttgtg
gatggccgcggccgatttcggctcgtgtcgcccgactttcttcaatcaccttctctacac
gatgcactcccgcaggatagctcagggttttcagtctacgatgagtcgctggcggtcgat
accctcgacgccatattacctgaacttaggccggaacagtttcgagaccacttcgatctt
gctttcctggccatgcacggacccgactgcgaggatggtgctattcagggattgctcgaa
tggcataaaatgccgtataccggaccaggcctcgttggatcggcggtgggtatcaataaa
attctgcaaaatgaactcatagcactggcaaacgggcagaaaaagaaaacggcaaccatt
agccgggacgactacgaacaggccgataaagcgcagttctttcaatcgctggtcgagcat
ttgggtttgccaattgtcataaaagccccgcatcagggctcatccattggcgtggccatt
gtacgcgaagccgatctggcgcagttttgccggtctgtggagcaatgctttttcacgatg
agcattcaaccggacggctggagtaaactgagtggatggacgagtttatcgggtacagaa
aagcacgagctggcacaaaagatggtcagtttggattcgggaatcagcttcccggttgtt
atcgaacaaacgggcgaagtgatcaagcatcccgccgactttgttgccagactggatgcc
ctaatggcgcaaagtagtcagcctattacgctggcgtcgctcaatgcagaagatgaagtt
ctttttgaagagtttattacgggccaggagttctcgtgcggagtaattcaggacgacgat
caggtcgcgatcgctctgcctccaacggagatttacaacgtaacgagctttgactttgag
tcgaagtataaactaaacacgactaaaaagcggattcctgtcgagacgagtctggagaac
aaccgtaagattcagttggcggttgcacaggtctttacccgattgggaattaatgtctat
tccagaatagacggttttctaacgcccgccggggatgtgctgctgcacgatcccaatacc
attccgggcatgtcgccctcctcgcttatattcaagcagatggcagaaatcggcttaaat
ctggcaaactcattgacgtatctaatccgtcagtcgctgcgtgaacgtatccgtacgggt
aaagacaccttccatttaaaacatctgctcgctgagctcgacgctcaactagcgcaccgg
aaagccaatccgctgcccgaacgggtcgtttccttcggatccggcgacgaagagttcatc
gcagctaaacagcagtataatgagttggccgcatcaggcaccgtacggccttccttgatg
tacattaagagcaaacaggaatcgcacgaaattccggttaatctgctgttcaaggatact
attgcggaactggaaacagccctgagtcaaccgcgccaccctttgctgctcgaaactgcc
gagttggctcgtcatatcacagaacgctacgtctaa
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