Spirosoma linguale: Slin_1221
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Entry
Slin_1221 CDS
T01156
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_1221
Transporters [BR:
sli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slin_1221
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-GeneID:
8724954
NCBI-ProteinID:
ADB37271
UniProt:
D2QL32
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Position
1486324..1487943
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AA seq
539 aa
AA seq
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MKKHISFGALLVLLTYLFSACHDVNVPITTSLTPDIFPQNTAQFIQASGPPYAALRGNFS
LDYWFMQSLSTDEAILPARGGNWYDNQGYRMLHYHDWTKDHGTTNSTWNWLSLVIGTTNQ
AMSILNTTIPASTPGKAMNLAELRMVRALSYFMMMDLYGNVPIDTTYGDFAPRPNTPRAQ
VFSFIEREVKAALPNLSRASGQAIYGRANKFTGFALLAKMYLNSEYYTGTQRYNDAIIAC
DSVINSGLYAIEPRSTYLQMFYPNNGPQMKEFIFAIPYDPAAGALPGTNSNMYHARYDVP
RSETKKFGLPFTPSAPRSTLPEFYANFKDPNDIRNNQWLTGLQFMNDGVTPVTVTTTKKG
YDQFYTGSDGSAPYTYQVNLTPDVVLRQDVATYDCGNDEIAWNMGYRNIKFYPDGTSTSR
NQNNDVPLFRYSDIILMKAEAILRGGAPTGGQTALSLVNQLRSNRTTSPALTSVTLEDIY
AERCREFTWETWHRNDMIRFGKFEGKWGFKTDASVNKRIFPIPTGAFTVNPSLVQNPGY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcatatatccttcggcgcgctactggtactgttgacgtacctgttttcggcc
tgtcatgatgttaatgtacccattacgacctcattaacccccgatatttttccgcagaat
acagcgcagtttattcaggcatcgggaccgccttatgcagctctgcgcgggaacttctcg
cttgattactggttcatgcaatcactgagcactgacgaagccattctgcccgccaggggt
ggaaactggtacgataaccagggctaccggatgctccattaccacgactggaccaaagat
cacggtacgacaaacagcacctggaactggctctcgctggtgatcggcacaaccaaccag
gccatgtcgatcctgaacacgacaataccagcctcaactcccggcaaagcaatgaatctg
gccgaactgagaatggtccgcgccctgtcgtattttatgatgatggatttatatggtaac
gtacccatcgacacgacctacggcgactttgcgccacgccctaatacgccccgagcgcag
gtattttcgtttattgagcgggaagtaaaagcggctctgcccaatctgagccgtgcgtcg
ggccaggcgatttatggacgggccaataaattcactggttttgctctgctggccaaaatg
tacctgaactcggagtattacaccggtacccagcggtataatgatgccattatcgcctgc
gacagcgtgatcaattcgggcttgtatgccattgaaccccggtcaacgtatctgcaaatg
ttctatccgaacaatggcccgcagatgaaggaattcatttttgccattccctacgatccg
gcggccggggccttgcctggtacgaacagtaatatgtaccatgcgcgctatgatgtgccc
cgttcggaaacaaaaaagtttggccttccctttacgcccagcgctccaagaagcacattg
cctgagttttatgccaacttcaaagatccgaacgacattcgaaataaccagtggttaacg
ggtctgcaatttatgaacgatggcgtaacgcccgttaccgtgacgacgaccaaaaaaggg
tacgaccagttctatacgggctctgatgggtcggcgccctacacgtaccaggtgaacctg
acgcctgatgttgtattgcgtcaggatgtggccacgtacgattgcggaaacgacgaaatt
gcctggaatatgggctaccggaacataaagttctatcctgatggtacgtcgacctcacgt
aaccaaaacaatgacgtacccctgttccgatattccgatatcattctgatgaaagctgaa
gccattcttcgcggaggtgcgccgacaggagggcaaacggctctctcattggtgaatcag
ttgcgatcaaaccggacgacatcgcctgctttaaccagcgtgacgctggaggatatttac
gcggaacgttgccgcgaatttacctgggaaacctggcaccggaacgacatgatccggttc
ggcaagtttgagggcaaatggggctttaaaaccgatgccagcgtaaacaagcggatcttc
ccaattccaacaggagcattcacggtcaacccgtcgctagtacagaatccggggtattaa
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