Spirosoma linguale: Slin_1350
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Entry
Slin_1350 CDS
T01156
Name
(GenBank) MiaB-like tRNA modifying protein
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sli03016
]
Slin_1350
Enzymes [BR:
sli01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Slin_1350
Transfer RNA biogenesis [BR:
sli03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Slin_1350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
DUF3663
Motif
Other DBs
NCBI-GeneID:
8725083
NCBI-ProteinID:
ADB37400
UniProt:
D2QM44
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Position
complement(1645622..1646971)
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AA seq
449 aa
AA seq
DB search
MQDTLLAVKKVAFYTLGCKLNFSETSTLARLMEQQGFERVEFNQQPDVFIINTCSVTDNA
DKKCRKIVREAQKINPEGYVAILGCYAQLKPKEISEIPGVDAVLGAAEKFRLHELMPTFV
KVPTGEPAQVFNSPIEEALDYHAAYSLNDRTRTFLKVQDGCDYPCAYCTIPLARGKSRSD
TIANVVKAAREIAERGVKEIVLTGVNIGDFGLINGQRTETFFDLVQALDEVDGIERFRIS
SIEPNLLTDEIIAFVAQSKRFVPHFHIPLQSGSNRVLGLMRRRYKRELYVDRVEKIKELM
PHACIGVDVIVGHPGETDVEFKETYMFLNELPISYLHVFTYSERPNTTALTIKPTVSGHI
RAERSKMLHILSDKKRRAFYDAQVGRTATVLFEEDIADGKMQGFTENYVRVVAKYDPLLI
NETLAVHLSGVNAEGLMEVTEPEAVLERH
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggatacattacttgccgtgaaaaaagttgctttttatacactcggttgtaaactg
aatttctccgaaacctctaccctggcccgacttatggaacagcaggggtttgaacgggtg
gagtttaatcaacaacctgatgttttcatcatcaacacctgctccgtgacggacaatgcc
gataaaaaatgccggaagattgttcgtgaagcacagaaaataaatccagaaggttacgta
gccattttgggttgctatgcccagttgaaaccgaaagagatttcggagataccgggtgtc
gatgcggtattgggcgcggccgaaaaattccgcctgcacgaacttatgccgactttcgtg
aaggtacccacgggagaacccgctcaggtgttcaattcacccatcgaagaagctctcgat
taccatgccgcctattcactcaacgaccggacacgaaccttcctgaaggtgcaggacggt
tgcgattatccctgcgcttactgcactattcctttagcaaggggtaaaagtcggtctgat
acgattgccaatgtagtaaaggctgcccgggagattgctgaaagaggagttaaagaaatt
gtgctgacgggcgtcaatattggtgattttggcttgatcaacggccagcggaccgaaacc
tttttcgaccttgttcaggcactggatgaggttgatgggatcgaacggtttcgtatttcg
agtattgagcccaacctgctaactgacgaaattattgcctttgttgcccaatcgaagcgt
tttgtgccgcattttcatattccgcttcaatcgggcagtaaccgcgtgctcggcctgatg
cgccgtcggtacaaacgtgagctgtacgtagaccgggttgagaaaataaaagaattgatg
cctcatgcctgcattggcgtcgatgtgattgtaggacatccgggcgagacagatgtagag
tttaaggaaacgtatatgtttctgaatgaattaccaatctcgtatctgcacgtattcacc
tactccgaacggccaaatacaacagcattaacgatcaaaccaaccgtatctggtcacata
cgggcggaacgatcaaaaatgttgcacattttgtccgacaagaaacgccgggctttttat
gacgctcaggttggccggactgcaaccgttctctttgaagaagatattgccgatgggaag
atgcaaggttttaccgaaaactacgttcgggtagtggcaaaatacgatcctttattaatt
aacgaaaccttagcggtacacttgagcggtgtcaatgcggagggtttgatggaggtaaca
gaaccagaagcggtattggaaagacattag
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