Spirosoma linguale: Slin_1424
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Entry
Slin_1424 CDS
T01156
Name
(GenBank) RagB/SusD domain-containing protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_1424
Transporters [BR:
sli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slin_1424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-GeneID:
8725158
NCBI-ProteinID:
ADB37474
UniProt:
D2QMZ0
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All DBs
Position
complement(1733146..1734960)
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AA seq
604 aa
AA seq
DB search
MKYINVWAIIGLTALLNTGCEKILEENPQSQIVPSYFNSPAGVLGGIAGVYNDIRGQWGT
EGFTVEMQAGTDDFLQGASSGGGPAYTYNGLNGSNFGSAWGVAFQDINTLNGVLQYGATI
DLPEATRKQYLAQAKFLRGFWYFYLVQTWGDVPLNTTFITVPSQAASRQPAAQVYEQIIK
DLTEAAADLPNTPTAPFLGKAATKPVAQLLLAKAYLTRGWLNNTAADFTQAATICSDIIA
NKSTYGLDLWADYGDAFVPANDYGKETMFVSDHVLDPKFGYYTVGGAAGGGAAQNLTPWF
TNWNYPNNSGVNSFVNASGTLVNSGTSGMIRDSQYGRPYVRMRPNTDRLKTGPNAGKSYF
LDQAFTKRDVDTRFANSFTTVYIANTAVTNSATAANNKRGISYTTVVGADTAVWLPDFEV
AGAPQFVGTRPFKGIVVPPSLWNNGIFPALKKFMDPSRGANFNDPSTRPVVLYRFSDVYL
TGAEAYLKAGDANKAADLLNVVRQRAAYKKTNTAAQNTAAAASMLITAADVTVDFILDER
SRELFGEWQRWHDLVRTRSLVRRVQAWNPEAAAYIKDYHMLRPIPQTQIDRVVDGPKFTQ
NPGY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatataaacgtttgggctatcattggccttacggctttactaaatacaggttgc
gagaagatactcgaagagaatccacagtcacagattgttccgtcttacttcaatagccct
gcgggggtgctgggcggcattgccggggtgtataacgacattcgggggcaatggggcacc
gaaggatttaccgtggagatgcaggccggtaccgatgattttttgcagggtgccagctcg
ggcggtggtcccgcctacacctataacggcctcaacggaagcaacttcggctcggcctgg
ggcgtcgcttttcaggacatcaacaccctgaacggtgtattgcagtacggcgctaccatc
gacttgccggaggctacccgcaagcaatacctggcccaggccaagtttttgcgtgggttc
tggtatttttatctggtgcagacctggggcgatgttccgctgaacaccacgttcattacg
gttccctcgcaggccgcatcgcgccagccagccgctcaggtatatgagcagatcatcaag
gacctgaccgaagctgccgccgatctgcccaacacacccaccgcgccgttcctcggaaaa
gccgccaccaagcctgttgcccaactgctgctggccaaagcctacctgacccgtggctgg
ctcaacaatacggccgctgattttacgcaggctgctacgatttgctccgatattattgcc
aataaatctacttatggacttgacctgtgggcggactatggtgacgcgtttgtgcccgcc
aacgactacggcaaggaaaccatgtttgtgagcgatcacgtgctcgatccgaagtttggt
tactatacagtgggtggtgccgccggtggtggtgccgcgcaaaacctgacgccctggttc
acgaactggaattacccgaacaacagcggtgtcaactcgtttgtgaatgcatccgggacg
ctggtaaacagtggcacgtccggcatgattcgcgactcgcagtacggtcgtccgtatgtt
cggatgcgccccaatacagatagattgaaaacaggtccgaatgcgggtaagagttatttt
ctggatcaggcatttaccaaacgggatgtcgatacccgctttgccaattcgttcactacg
gtctacattgccaatacagcggttaccaattcggctacagctgctaataacaaacggggt
atcagctatacaaccgtcgttggtgccgacaccgccgtttggctccccgatttcgaggtg
gcgggcgctccccagtttgtcggtacgcggccttttaaagggatcgtggtgccgccaagc
ctgtggaacaatggtatttttcccgcactgaagaaattcatggaccccagccggggtgcc
aacttcaacgacccatcgacgcgtccggttgtgctgtatcgcttctcggatgtgtatctg
acgggcgccgaagcctacctgaaagcgggtgatgcaaacaaagcggctgatttactgaat
gtagtgagacaacgggctgcctacaaaaaaaccaatacggctgctcagaacacagcagcc
gctgcgtccatgctcattacggccgctgatgtcacggtagactttattctggatgagcgc
agccgcgaattatttggcgagtggcagcggtggcatgacttggttcgtacccgctcgctg
gtacgtcgtgtacaggcctggaacccggaagcagccgcttacatcaaggattaccatatg
ctgcggcccattccccagacgcagatcgaccgcgtggtcgatggacctaagttcacgcaa
aaccctggctattaa
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