Spirosoma linguale: Slin_1623
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Entry
Slin_1623 CDS
T01156
Name
(GenBank) ABC transporter
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_1623
Transporters [BR:
sli02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Slin_1623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C39
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_23
AAA_29
DUF3335
Peptidase_C39_2
AAA_25
RsgA_GTPase
AAA_15
AAA_30
MobB
AAA_14
Zeta_toxin
nSTAND3
AAA_16
cobW
NACHT
AAA_19
AAA_28
Motif
Other DBs
NCBI-GeneID:
8725358
NCBI-ProteinID:
ADB37670
UniProt:
D2QPT7
LinkDB
All DBs
Position
complement(1953280..1955487)
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AA seq
735 aa
AA seq
DB search
MAKKYPFYRQYDLMDCGPTCLRMISKFHGKSLDAAYLREIANLARDGTTMGGLADAAERI
GFSTLALNAQYDTLAEQIPLPCIAHWRQRHFVVVYEATPTKVVVADPGHGLLTHTKQEFL
KGWIPEKTISDDSEGVLLLFEPTLRFYEQENTPKANKKSFSGFLLRYFRPYNRYGLQLFL
SLLTISLLQLALPFLTQQIVDTGINTRNLNFIYLVLIAQLVLFISQTGVNVLRSWILLHV
TSRVNLRMLSDFMMKLMRLPIAFFDSKGTGDILQRIQDHNRIQAFLSATTLDVLFSAVSF
LIFGSILFYFNAQLFFIFLLGSGLYMVWVLLFLKQRAEIDYRYFDQAAGNQSSAIQLING
MQEIKLNGSEKRRRWEWEAIQARLFKLNIRSMALSQTQNEGGRFLNEVKNILISFVAAKS
VIDGHITLGSMLSVQYIVGQMNVPINNFIAFIRTYQDAKLSLGRLTEIHDKDDEESTVNT
MIYELPTERTISFDNVSYRYGSSSSELVLKNISFTVPEGKVTAIVGASGSGKTTLLKLLL
KFYEPVQGQIHIGNSNLKNISYDFWRSQCGVVMQEGYIFSDSISRNVSESDSNGLIGRKK
LREAVSIANIEEFIESLPNGFNTRIGSSGTGLSGGQKQRILIARAVYKDPAFILFDEATS
ALDANNESVIMKNLDSFFKNRTVIIVAHRLSTVKAADQIIVLDKGEIVERGTHLELVNQK
GNYYSLVKNQLELGN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaaagtatcccttttaccgtcagtacgacctgatggattgtgggcctacgtgc
ctacggatgattagtaagtttcatggcaagtcgttagatgccgcttatcttcgggaaata
gccaatttggcccgcgacggtaccactatgggtgggcttgccgatgccgccgagcgaatt
gggtttagtacactggcgttaaatgctcaatacgataccctggccgagcaaattccgttg
ccctgtattgcgcactggcggcaacggcattttgtggtggtgtatgaagcaacaccaaca
aaagtagttgtcgccgaccccggccacggcttgctgacgcatactaaacaggagtttttg
aagggatggattcctgaaaaaactatttcagacgactcagaaggggtcttgctactgttt
gagccaacactccggttttatgagcaagagaatactcctaaagcgaacaagaaatcattt
agcggatttttgttacgctattttcgaccgtataaccgatatggcctgcaactctttctt
agcctattaacaatcagcttactgcaattagccttaccttttttaacccagcaaattgtc
gatacagggattaatacccgcaatctcaatttcatttacctggtactgattgctcagttg
gtcttattcatttcccagaccggagtcaacgtactgcgcagttggattttgctgcatgtg
acaagccgggtaaacctgcgtatgctctccgacttcatgatgaagctaatgcggctacct
atagcctttttcgattcgaaaggaactggtgatattttacaacggattcaggatcacaat
cgcatccaggcttttttatcagccactacgctggacgtacttttttcggctgtctccttc
ctaattttcgggtcgattcttttctatttcaatgcccagctatttttcattttcctcctc
ggatcgggcctgtatatggtctgggtcttgttgtttttaaaacaacgtgccgaaatcgat
tatcggtatttcgaccaggctgccggtaaccagagcagtgcgatacagctcatcaacgga
atgcaggaaataaaactcaatgggtctgaaaaacgacgacgctgggagtgggaagccatt
caggcccgtttatttaaattaaacatccgtagtatggctctttctcaaacgcaaaatgag
ggtgggcgttttctcaacgaagtcaaaaatattctaatcagttttgttgccgcaaaatca
gtaattgatggccatattactcttggctcgatgctatccgttcaatacattgttggtcag
atgaatgtgcccatcaacaattttattgccttcattagaacgtatcaggatgcaaaatta
agtttgggcagattgaccgaaattcatgataaagacgacgaagagtctacggttaacaca
atgatttatgaactaccaaccgagcgaactatttccttcgataacgtaagctacagatac
ggtagcagtagttctgaattagtattgaaaaatatcagttttacggttcccgaaggaaaa
gttacggccattgtaggggcaagtggcagtggcaaaacaactttattaaagctactgtta
aaattttacgaaccggttcaaggccaaattcatattggcaatagtaatttaaaaaacatc
agctatgatttttggcgtagccagtgtggagtcgttatgcaggaagggtatattttttcg
gattcaatttcgcgaaatgtgagtgagtcagactccaatgggttaattggccgaaaaaag
ctacgagaagccgtaagcattgcaaacattgaagagtttatagaaagtctgccgaatggg
tttaacacacgaattggctccagcggaacagggttaagcggtgggcagaagcaaaggata
ttgatcgcccgagcggtttacaaagatcccgcattcattctttttgatgaagcaaccagt
gctttggacgccaataatgaatcggttatcatgaagaacctggatagctttttcaaaaat
agaacagtgattattgtagctcaccggctgagtacggtaaaagcagctgatcaaattatt
gtacttgacaaaggagagattgttgaacgcgggactcacctcgaattagttaaccaaaaa
gggaactactacagcttagttaaaaatcaattagagcttggcaactaa
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