Spirosoma linguale: Slin_1730
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Entry
Slin_1730 CDS
T01156
Name
(GenBank) OmpA/MotB domain-containing protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_1730
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_1730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF3530
AHSA1
Big_8
DUF2574
Motif
Other DBs
NCBI-GeneID:
8725467
NCBI-ProteinID:
ADB37776
UniProt:
D2QQS4
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All DBs
Position
2079684..2080652
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AA seq
322 aa
AA seq
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MLTNKTPWIILLVLWMIGSTWWHVCKIKQLCGNVTQPVVAPNDISFDSTSSGAGGYSIAD
GDLFRLDLPGNFSFAKSGANANMNTLGGSLGTMIAYLKANPGRSLEIVGYYSSAEANTTP
FPNLGLARAEGIRQYLVQQGIPAASLTTKGVAKDLSFRTAQGDSLYGGIDFAFSGAEPAM
STDTATAPAVVKLTEPTTEKALAEAEKFTSVFKPIDLYFPLAQANYLQTDETKKFFAEAV
AYLSSHKDKKLVLTGHTDSSGPDAVNMQLSRDRANDVKNKLRKTGIEASQIEVRAKGETE
PKADNSTISGRKANRRVSVVVE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaaacaaaactccctggattatcctgctagtactatggatgatcggttctacc
tggtggcatgtgtgtaaaattaagcagctttgtggcaatgtaactcaaccggttgtcgcc
ccaaacgacatctccttcgacagtacatcatccggtgccggcgggtactcgatagccgat
ggggacctctttcggctggatttacccggtaatttcagctttgccaaatcaggtgccaac
gcaaacatgaacaccctgggcggatcgctcggaacaatgattgcgtacctgaaagctaat
cccggtcgaagcctggagattgttggctactactcgtcggctgaagccaatacaactccg
ttcccaaatctgggcctggctcgggcagagggcatccggcaataccttgttcagcagggg
ataccggctgcttcactgacgacaaaaggggtagcaaaagacctgtcatttcggacagcc
cagggcgactcactttatggaggtattgattttgccttcagcggagctgagccagccatg
tcaacagacaccgctaccgcaccggctgttgttaaactaacggagccaaccacggaaaaa
gcattggctgaggccgaaaaattcacctcagtcttcaagccaatcgacctctacttcccc
ctggcccaggcaaattatctccagactgatgaaacaaaaaaattctttgcagaagccgtt
gcgtatttgtccagtcataaagataaaaaactcgtccttaccgggcataccgacagttct
ggtcccgatgcggtaaatatgcagttatccagagatcgtgctaatgacgttaagaacaaa
ttgcgtaaaacgggtattgaagccagccagatagaagttcgggctaaaggcgaaaccgaa
cctaaagcagataacagcaccatatcaggccgaaaggccaaccgacgcgtttccgtagtc
gttgaataa
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