Spirosoma linguale: Slin_1938
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Entry
Slin_1938 CDS
T01156
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_1938
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_1938
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
OMP_b-brl_3
TTR_TEN1-4
SdrD_B
Motif
Other DBs
NCBI-GeneID:
8725675
NCBI-ProteinID:
ADB37983
UniProt:
D2QBV4
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Position
2345762..2348167
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AA seq
801 aa
AA seq
DB search
MGGLSRISLLIGLWVAAGLGCLAQSSTCTSVLKGQILGQENREPLVGATLYVRELKTGAV
ADSAGYFQLGQLCPGNYTIDFQFVGYKVTTQSIVIRQEPLVRLNPVLLVPDNQTLQEVVV
TEHRSEAQQLLQTQVSLSGAALDQTRGQSLGESLKALTGLYAIQSGPSISKPVIHGLYSN
RIIILNNGIRQEDQQWGSEHAPQVDQFLASRLTVIKGAASIRYGSDAIGGVILVEPSAMP
TRPGIQAEVNLVGATNGGMGVVSGLVEGAFDKKLAGLSWRLQGTLKRSGYVKTPNYYLEN
TSYQENNFSGDLHYDHKNFGVELFYSQFDTKVGLFTGAQVGSLADLYTAISRPEPLVQPV
FSYALNRPYQAVQHDLFKGRAHLHLPKGGTLTATVSRQQNTRREYDFVSFSGITTPELYL
KLVTHTADLVWEHAPIKTEAGGRAGQWSGSVGFNGITQGNVRQYLFLIPNFRNYGAGLFA
IERYAVGRLTLEGGLRYDYRWLRAYFLDEVTKQIYFTTHNWQNANGSLGVAYQLRPDLTL
TGNVSTAWRAPNVADLYSNGLHQSAVAYERGNPNLRPEQAVNSNLVLAYAGKRLSGEIGV
YSNRIENYIYLKPDSVPIVRQRGAFPSYTYNQVRATFRGVDATLTYKFTDQLAFTTKNSL
LFAYNQTDHDYLVFIPANRSDNTLRYDWDRWGKLAKPYVSMTGLYVSRQNRSPSVTTRQE
NGAVIFTGDFAAPPPAYFLLGAEVGFQTQLGKQPLSVILSGTNLANVAYRDYLNRFRYFA
DEPGRNIMLKVKLPLAFPKRS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtttgagcagaataagtttattgattgggttgtgggtagccgcagggctgggg
tgtctggcgcagagcagcacctgtaccagcgtgctgaaagggcagattctggggcaggaa
aaccgcgagccactcgttggagcgactctttacgttcgggagttgaaaaccggtgccgtt
gctgattcagcgggttattttcaactcgggcagctgtgtccgggaaattataccatcgac
tttcagtttgttggttataaagtcacgacacagtcaatcgtgatcaggcaggaaccgctg
gttcgcttaaatccggttttgctggtgcccgacaatcaaaccctgcaggaggttgtcgta
acggaacaccggtccgaagcccagcagctgcttcaaacacaggtgagcctgtcgggggcg
gctctcgaccaaaccaggggtcaatcgctgggcgagagtttgaaggcacttaccggctta
tacgccatccaatccggccccagtatttcaaagccggtcattcacgggctttacagcaac
cgaattataattctcaacaatggcatccggcaggaagatcagcagtgggggagtgagcac
gcgccccaggtcgaccagtttctggcgtcccggctgacggtgatcaaaggggcggccagt
atccgctacgggtccgacgctattggcggggttattttggtagagcccagcgccatgccc
acccggccgggcattcaggccgaagtaaatctggttggagcaacgaacgggggcatgggt
gtggtatcaggtctggtagaaggggcattcgataaaaaactggccgggttaagctggcga
ttgcagggaaccctgaaacggtcgggctacgtcaaaacaccgaactactatctcgaaaat
accagctaccaagagaataacttttccggtgatctgcattatgaccacaagaattttggt
gtcgagttgttttacagtcaattcgatacgaaagtgggtctgtttacgggtgcgcaggtg
ggtagtctggccgatttatacacggccattagccgacctgaaccgctggttcagccggtt
ttttcctatgcattgaaccgcccttatcaggccgttcagcatgacttgtttaaagggcgg
gcccatctacatctgccaaaagggggcacgctgaccgctaccgtttcccggcagcaaaac
acccgccgggagtatgactttgtctcgttcagcggcataacgacgcccgaattgtatctg
aaattagttacccataccgccgatctggtttgggagcatgcgccgattaaaacggaagcc
ggaggccgtgcggggcaatggtcgggaagtgtgggttttaacgggatcacgcaaggcaac
gtgcggcaatatctgttcctgattcctaatttccggaactacggtgccggattatttgcc
attgaacgctacgcagtaggacgtctgaccctggagggcgggttgcggtatgattaccgc
tggttacgggcttacttcctcgatgaagttaccaaacaaatctattttaccacccataac
tggcagaacgccaacggatcgctgggggtagcttaccagctccggcccgacctgaccctg
accggcaacgttagcactgcctggcgggctcctaatgtcgcggatttgtattccaacggc
ctgcaccaaagcgcggtagcctacgaacggggtaatcccaacctgcgcccggaacaggct
gtcaacagtaacctggtgctggcctatgccgggaagcggctgagtggggaaattggcgtt
tatagcaaccggatcgaaaattacatttacctcaagcccgattcggtacccattgtccgg
cagcggggtgctttcccgtcgtatacctataaccaggtgcgggccacgtttcggggagtc
gatgctaccctgacctataaatttaccgatcagctggcgttcacgacaaaaaactcgctg
ctgttcgcctataaccagaccgaccacgactacctcgttttcatccccgccaatcggtcg
gataatacgctgcgttacgattgggaccggtggggtaaacttgccaaaccctatgtgtcc
atgacgggcttgtacgtatcccgacaaaaccgttctccctccgtgactacccgacaggag
aacggggccgttattttcaccggcgattttgctgcgccaccacccgcttatttcctgctg
ggggccgaagtggggttccagactcagctcggcaagcagccccttagtgtcatcctgagc
ggcaccaacctcgccaatgtcgcttaccgcgattacctgaaccggttccggtatttcgcc
gatgagccgggacgcaacatcatgctcaaagtgaaattaccactggcgtttcccaaaagg
tcttaa
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