Spirosoma linguale: Slin_1945
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Entry
Slin_1945 CDS
T01156
Name
(GenBank) alpha-L-rhamnosidase
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
sli
Spirosoma linguale
Pathway
sli00946
Degradation of flavonoids
sli01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
Slin_1945
Enzymes [BR:
sli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
Slin_1945
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Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_C
Bac_rhamnosid_N
Glyco_hydro_2_N
MGH1-like_GH
GDE_C
Glyco_hydro_36
Trehalase
Motif
Other DBs
NCBI-GeneID:
8725682
NCBI-ProteinID:
ADB37990
UniProt:
D2QBW1
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Position
2356484..2358943
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AA seq
819 aa
AA seq
DB search
MQHAPMKIKLSTLLILVITLLAVSSQSMAQSTIREDLLQKPWKAQWITGPGRPINRFTAA
SDLSLKDYGVYKFRKTIELASKPASFVVHVSGDNRYKLFVNGKQVAQGPARGDLYFWNFE
TLDLAPYLQAGRNTVAAVVWNDGRLKPEAQISFLTAFILQGDSPAEEILNTNDSWKTSKD
ESYQPLAVRVPGYYVAGPAELLDMSKHLKGWEKTDYDESKWVSARQIGPGVTKDAAVNST
GWMLVPSPLPAMEMTTQRLATTRKASGVTVPAGFPATATKVTIPANTTATLLLDQGFLTN
AYPTLQFSGGQGAGLSIGYSEGLYIRKNENVNGPRVPSLPKGNRNEVDGKIFIGKADSLL
SDGTANQVYTPLWWRTYRYVQVVVSTKADPLVIDDIYGTFTGYPFTVNAQLKSQNPELGK
MLDIGWRTARLCAFETYMDCPYYEQLQYIGDARIQGLVSLFYAGDDRLLRYGLTLMDHSR
LAEGITLSRYPTDLHQQIPTFSLWWVAMLHDYYRYRPDSLFIKDKLPGARQVLSFFERYQ
QADGSLKNVPYWIFTDWTQGKGWDFGMAPVGQHGESAVLDMQLLWTYQLAAELENNIGLK
ELGRQYTSRAEQLKKTILRKYWNSGRNLFADTETKDTYSQHANSLAILSGVTQASQATAI
AKTMLADTSLAPASIYFKFYLHQALTKAGLGDDYLTWLDKWRENMASGLTTWAETSNVNT
SRSDCHAWGSSPNLEFFRTVLGIDSDAPGFAKVKITPHLGSIDAISGEMPHPNGKVSVAY
KVEKGALKADITLPPKTTGSFVWKGKTAVLNAGKNTLTM
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacgcgcccatgaaaataaagttatctaccttactcatccttgttatcacgctg
ctggcggtcagctcccagtcgatggcgcaatccaccattcgggaagatcttctgcaaaaa
ccctggaaagcccagtggattaccgggccggggcggcctatcaatcggtttacggcggca
tcggacctgagtctgaaagactatggcgtgtataaattcaggaaaaccattgagttggcc
agtaaaccagcttcgtttgtcgtccatgtgtcgggcgacaaccggtacaaactctttgtg
aatgggaaacaggtagcccaggggccagcgaggggggatctgtacttctggaatttcgaa
acgctggatttggctccttacctgcaggcgggccggaatacggtggcggctgtggtctgg
aacgatggacggctgaagcccgaagcccagatctctttcctgacggccttcatcctccag
ggcgatagtcctgccgaggaaatcctgaacacgaacgatagctggaaaaccagtaaggac
gaaagctaccagcccttggctgtgcgggttcctggctattacgtggccgggcctgccgaa
ctgctcgacatgagcaagcacctgaaaggctgggagaaaaccgactacgatgagagtaaa
tgggtcagtgcccgccagattggccccggcgttactaaggatgcggctgtcaattcgacg
ggctggatgctggtgccctccccattgcccgctatggaaatgacaacccagcggctggct
accacccgaaaagcaagcggtgttactgtgcctgctggttttccggccacggccacaaaa
gtgaccattcccgccaacacaacggcgacgctcctgctggatcagggctttctgaccaac
gcttacccaacacttcagtttagcggtgggcagggcgcgggcctatccatcggctactcg
gaagggctctatatccgcaagaatgaaaacgtcaacggcccaagagtgccctcgctgccg
aaagggaaccggaacgaggtcgacggaaaaatctttatcggtaaggcagatagtctcctt
tccgacggaacggccaatcaggtgtacaccccactctggtggcgaacctaccggtacgtg
caagtggtagtgagcaccaaagccgacccgctcgtgatcgacgatatctacggtaccttt
acggggtatccgtttacggtcaatgcccagctcaaaagtcagaatcccgagttgggtaaa
atgctcgacattggctggcgaactgcccggctctgcgccttcgaaacctacatggactgc
ccctattacgaacagctgcaatacattggcgatgcccgcatacaagggctggtttcgctc
ttctacgccggggatgatcgcctgttgcgctacgggctgacgctcatggaccattcccga
cttgccgaaggcatcaccctgagccggtacccaacggacctgcatcagcagattccgacg
ttctcgctctggtgggtggctatgctgcacgattactatcgctaccgccccgacagcctg
ttcattaaagacaagctgcccggtgcccgtcaggtactgtcgttctttgaacgctaccag
caggccgatggatcgctgaaaaatgtgccgtactggatattcaccgactggacgcagggc
aaaggctgggatttcgggatggcacccgtcggtcaacatggcgaatcggcagtgctcgat
atgcagctgttgtggacgtatcaactggccgccgaacttgaaaacaacattgggctgaaa
gaactgggccgacagtacacaagccgggccgagcagcttaaaaagaccatcctgcgtaaa
tactggaactcgggtagaaacctctttgccgataccgaaacgaaagatacctattcgcag
cacgccaattcgctggctattctgtcgggggtaacccaggccagtcaggcgacggcgatt
gccaaaacgatgctggccgatacgtcgctggcaccggcttcgatctacttcaagttttac
ctgcaccaggccctcaccaaagccgggctgggcgacgattacctgacgtggctggataag
tggcgcgaaaacatggcatcgggtctgaccacctgggccgaaacgtcgaatgtgaacacc
tcgcgctccgattgtcatgcctggggatcgagccccaacttggagtttttcaggaccgtg
ctggggatcgacagcgacgcgccgggttttgccaaagtaaaaatcacgccccatttaggg
tccattgacgccatcagtggtgaaatgccccacccgaacgggaaagtgtcggtagcctac
aaagtggagaaaggggcgctcaaagctgatattacgcttccgcccaaaacaaccggaagt
tttgtctggaaaggaaaaacggccgtactcaacgccgggaagaatacgctgacgatgtaa
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