Spirosoma linguale: Slin_2108
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Entry
Slin_2108 CDS
T01156
Name
(GenBank) glycoside hydrolase family protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
sli
Spirosoma linguale
Pathway
sli00520
Amino sugar and nucleotide sugar metabolism
sli01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
Slin_2108
Enzymes [BR:
sli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
Slin_2108
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Motif
Pfam:
Glyco_hydro_43
GH43_C2
CBM_6
DUF1349
Motif
Other DBs
NCBI-GeneID:
8725846
NCBI-ProteinID:
ADB38143
UniProt:
D2QDL3
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Position
2549102..2551054
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AA seq
650 aa
AA seq
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MNRYFSLFLILSTLLSGAPAVHAQQTSNYTQVNTYVNPVLPGDHPDPTMLRVGDDFYHCG
SSFHFTPYLPIYHSKDMVHWEVISRVVPPTASFVSDRPSAGIWQGAITYFYGSYWIYFSA
NGQWFSKASSPKGPWSEPVRVKGDPKTGPLGYDNSIFVDDDGKPYMVIKNGQKTNRLQEL
GRDGQLTASAIDLDWVNAKLQYSWAEGPVMCKRNGYYYYFPAGDVSGGQYAMRGKALTAD
STQWERLGDFFKPITDPKTGFRRPNHISAPIQLADGTWWTIGQSYEKPLEGADWSGMGRQ
TGLYQVIWEGDRPWGLAPTTKPVARPNLPQSGILWRSAQSDRFDSDVLSPNWHFLSKRVA
DRYSLSARKGWVRLSPDTARVHLMQKETDHYYTAVTRVDLNADDPAAKAGIYLTNGNQKV
FAQLYSGFDTGKKIVFRLDTAIRTVPNSVGSVVWLKVERNEHQLTGYYSRDGTKWTAVGP
PISSVSLDKAQPNFNSWVGTSIGLFAEGKPADFDFFICKDGFSSLPAVGYSNYYGVEKTG
VTAGSGVTNDSSQGGWFMLSGVDLGMGNDAAKQVQLQVSTTMEGTLELWLDDLSNGKKIA
TIPFKSTTGKATSKTVSQSVKGVSGHHDVFVKFPAGKANIVTVKALQFQK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttactttagcttatttcttatcctgagcaccttgctctcgggagccccagct
gtccatgcacagcagacgtccaactacacccaggtcaacacctacgtcaacccggtactt
cccggcgatcatccagacccaaccatgctgcgcgtgggggatgacttttaccattgcggg
tcgagttttcatttcacgccctatctgcccatctatcattccaaagacatggtgcattgg
gaggttatcagccgcgtagtgccgcccaccgctagttttgtctccgacaggccttcggcg
ggtatctggcaaggggccattacctatttctacgggtcgtactggatttacttctcggcc
aacgggcaatggttttccaaagccagcagccccaaaggaccgtggtcggagccggtgcgg
gtgaaaggtgatcccaaaacggggccactgggctacgacaattcgatctttgtcgacgac
gatggcaagccgtacatggtgatcaagaatggtcagaaaaccaaccgattgcaggagctg
ggacgggatggccagctgacggcctcggccattgatctcgactgggtcaacgccaaacta
caatatagctgggcggaggggccggtgatgtgcaagcggaatggctactactactatttc
ccggcgggcgacgtgtcgggcgggcaatatgccatgcggggcaaagccctcaccgccgac
tcgactcaatgggaacggctcggcgatttcttcaaacccatcaccgatcctaaaacggga
ttccgtcggcccaaccacatttcggccccgattcagttggccgatggcacctggtggaca
attggccaaagctatgaaaagccgcttgaaggagccgattggtcgggcatgggcaggcaa
acgggcctgtatcaggttatttgggaaggagaccgtccgtggggcctagcgcccaccacc
aaaccagtggcacgacccaatctgccccagtcgggtattctgtggcgaagcgcacagtca
gaccggttcgatagcgacgtgctttcgccgaactggcattttttgagcaaacgggtagca
gaccggtattcgttgtcggcgcgtaaaggctgggtacgtctctcacccgacaccgcccgt
gtgcacctgatgcagaaagaaacggatcattattataccgccgtcacccgtgtcgacctc
aacgccgacgatcccgctgcaaaagccggtatctatttgaccaatggcaatcagaaggtg
tttgcccaactctacagtgggttcgatacgggtaaaaagatcgttttcagactcgatacg
gccatccgcacggtgcccaattcagtcggcagcgttgtctggctgaaagtggaacggaac
gagcaccagctgaccggctactacagccgtgatggaacgaaatggaccgccgttgggcct
cccatcagttcggtaagtctggacaaggcccaacccaatttcaattcgtgggtgggtacc
agtataggtttatttgccgaaggcaaacccgccgactttgattttttcatctgtaaagac
ggcttttccagccttccggccgtgggttacagcaattattatggcgtcgaaaaaacaggg
gtcactgccgggtctggcgttaccaatgactccagtcagggcggctggtttatgctgtcg
ggcgttgatttaggcatgggtaacgacgcagctaaacaggttcagctccaggtatcgact
actatggaaggaacgcttgagctatggctcgacgatttaagtaacgggaaaaagatcgcc
accatcccgtttaaatcaactactggcaaagcgacctcgaaaacggtaagccaatccgtc
aaaggggtttcagggcatcacgatgtctttgtgaaatttccagctggaaaagctaatatc
gttacggtgaaagcgttgcaatttcaaaagtag
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