Spirosoma linguale: Slin_2269
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Entry
Slin_2269 CDS
T01156
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sli
Spirosoma linguale
Pathway
sli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Slin_2269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sli03400
]
Slin_2269
Enzymes [BR:
sli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Slin_2269
DNA repair and recombination proteins [BR:
sli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Slin_2269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
TerS_C
UPF0147
PBDC1
Motif
Other DBs
NCBI-GeneID:
8726010
NCBI-ProteinID:
ADB38290
UniProt:
D2QEN8
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All DBs
Position
2750827..2751450
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AA seq
207 aa
AA seq
DB search
MTDINSSALTHLAQDPVMARIIAETPVPKLVNDYADDVYLALLESIVSQQISVKAADAIF
SRFRALFPDKYPQADALLLKTTDELRSAGLSFQKIKYLQSVAEFSLEKPIDRVHLDALTD
EEIVQYLLPIKGVGRWTVEMLLMFVLDRPDIFPIDDLVIRQRMLRAYPEQTNGLTGKALY
KVLLSIAEPWRPYRTTASRYLWRWQAT
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgacggatattaattcttctgccctgacgcacctcgctcaggacccggttatggcccgc
attatagcggaaactccagtaccgaaactagttaacgactacgccgatgatgtgtatctg
gcgctgctcgaaagcatcgtttcacagcagatttcggtgaaagcggccgatgccatcttc
agccgcttccgggcactgtttccggataagtaccctcaggcggatgcgcttttactgaaa
accaccgatgaactgcggagtgccggtttgtcgtttcagaagattaagtacttacaaagc
gtagcggagttctcgctggagaaacccatcgaccgagtgcatcttgatgccctaacggac
gaggaaattgtgcaatacctgcttcccattaaaggggttggccggtggacggtcgagatg
ctgctaatgtttgtgctggatagacccgatatttttcctatcgacgatctggttattcgt
cagcggatgctgcgggcgtaccccgaacaaaccaatgggctgacgggtaaagccttgtac
aaagtcctgctcagcattgcagaaccctggcgaccgtaccgaactaccgccagccgatac
ctctggcgatggcaggcaacctaa
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